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DirectCR-RSSA #346

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DirectCR-RSSA #346

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Commits on Sep 10, 2023

  1. Write RSSACR-Direct but it's incorrect. I will turn it into CR-RSSA.

    @Vilin97
    Vilin97 committed Sep 10, 2023
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Commits on Sep 11, 2023

  1. Fix the main part of the SSA code. Time to clean up.

    @Vilin97
    Vilin97 committed Sep 11, 2023
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Commits on Sep 12, 2023

  1. Rename to DirectCRRSSA.

    @Vilin97
    Vilin97 committed Sep 12, 2023
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  2. Fix a docstring.

    @Vilin97
    Vilin97 committed Sep 12, 2023
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  3. Shorten a function.

    @Vilin97
    Vilin97 committed Sep 12, 2023
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  4. Uncomment tests in ABC.jl

    @Vilin97
    Vilin97 committed Sep 12, 2023
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  5. Delete comment.

    @Vilin97
    Vilin97 committed Sep 12, 2023
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  6. Add DirectCRRSSA to the diffusion test.

    @Vilin97
    Vilin97 committed Sep 12, 2023
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  7. Add DirectCRRSSA to ABC.jl.

    @Vilin97
    Vilin97 committed Sep 12, 2023
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  8. Merge branch 'master' 

    Conflicts:
	src/spatial/bracketing.jl
	src/spatial/reaction_rates.jl
    @Vilin97
    Vilin97 committed Sep 12, 2023
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  9. Shorten getindex.

    @Vilin97
    Vilin97 committed Sep 12, 2023
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  10. Remove the low bound on site rates, as it is not used.

    @Vilin97
    Vilin97 committed Sep 12, 2023
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  11. Add an @inbounds.

    @Vilin97
    Vilin97 committed Sep 12, 2023
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  12. Add AbstractMatrix back in.

    @Vilin97
    Vilin97 committed Sep 12, 2023
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  13. Remove another change to shorten the PR.

    @Vilin97
    Vilin97 committed Sep 12, 2023
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  14. Shorten a function.

    @Vilin97
    Vilin97 committed Sep 12, 2023
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  15. Swap order of functions.

    @Vilin97
    Vilin97 committed Sep 12, 2023
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  16. Remove typos from ABC.jl.

    @Vilin97
    Vilin97 committed Sep 12, 2023
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  17. Fix test.

    @Vilin97
    Vilin97 committed Sep 12, 2023
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Commits on Sep 14, 2023

  1. Merge branch 'master' of https://github.com/SciML/JumpProcesses.jl in… 

    …to RSSACRDirect
    @Vilin97
    Vilin97 committed Sep 14, 2023
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Commits on Aug 21, 2024

  1. Write RSSACR-Direct but it's incorrect. I will turn it into CR-RSSA.

    @Vilin97
    Vilin97 committed Aug 21, 2024
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  2. Fix the main part of the SSA code. Time to clean up.

    @Vilin97
    Vilin97 committed Aug 21, 2024
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  3. Rename to DirectCRRSSA.

    @Vilin97
    Vilin97 committed Aug 21, 2024
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  4. Fix a docstring.

    @Vilin97
    Vilin97 committed Aug 21, 2024
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  5. Shorten a function.

    @Vilin97
    Vilin97 committed Aug 21, 2024
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  6. Uncomment tests in ABC.jl

    @Vilin97
    Vilin97 committed Aug 21, 2024
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  7. Delete comment.

    @Vilin97
    Vilin97 committed Aug 21, 2024
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  8. Add DirectCRRSSA to the diffusion test.

    @Vilin97
    Vilin97 committed Aug 21, 2024
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  9. Add DirectCRRSSA to ABC.jl.

    @Vilin97
    Vilin97 committed Aug 21, 2024
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  10. Shorten getindex.

    @Vilin97
    Vilin97 committed Aug 21, 2024
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  11. Remove the low bound on site rates, as it is not used.

    @Vilin97
    Vilin97 committed Aug 21, 2024
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  12. Add an @inbounds.

    @Vilin97
    Vilin97 committed Aug 21, 2024
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  13. Add AbstractMatrix back in.

    @Vilin97
    Vilin97 committed Aug 21, 2024
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  14. Remove another change to shorten the PR.

    @Vilin97
    Vilin97 committed Aug 21, 2024
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  15. Shorten a function.

    @Vilin97
    Vilin97 committed Aug 21, 2024
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  16. Swap order of functions.

    @Vilin97
    Vilin97 committed Aug 21, 2024
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  17. Remove typos from ABC.jl.

    @Vilin97
    Vilin97 committed Aug 21, 2024
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  18. Fix test.

    @Vilin97
    Vilin97 committed Aug 21, 2024
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  19. Merge branch 'RSSACRDirect' of https://github.com/SciML/JumpProcesses.jl 

     into RSSACRDirect
    @Vilin97
    Vilin97 committed Aug 21, 2024
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  20. Merge branch 'master' into RSSACRDirect

    @Vilin97
    Vilin97 committed Aug 21, 2024
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  21. Merge branches 'RSSACRDirect' and 'RSSACRDirect' of https://github.co… 

    …m/SciML/JumpProcesses.jl into RSSACRDirect
    @Vilin97
    Vilin97 committed Aug 21, 2024
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  22. Merge branch 'master' into RSSACRDirect

    @Vilin97
    Vilin97 committed Aug 21, 2024
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  23. Address comments.

    @Vilin97
    Vilin97 committed Aug 21, 2024
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