02_2_join_configs.py.py

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# %% [markdown]
# # Join aggregated configs from each model

# %%
import pandas as pd

# %%
filepaths_in = snakemake.input
filepath_out = snakemake.output[0]
filepaths_in

# %%
filepath_out

# %% [markdown]
# ## Example
#
# - first file

# %%
pd.read_csv(filepaths_in[0], index_col=0)

# %% [markdown]
# ## Load all model configs

# %%
configs = pd.concat([
    pd.read_csv(fname, index_col=0) for fname in filepaths_in
])
configs

# %% [markdown]
# ## Dump combined to disk

# %%
_ = configs.to_csv(filepath_out)
filepath_out