Alpha recognisers for pippit, bittern & cisticola

src/AnalysisConfigFiles/RecognizerConfigFiles/Towsey.AnthusNovaeseelandiae.yml

@@ -0,0 +1,61 @@
+---
+
+# Australasian Pipit = Towsey.Anthus novaeseelandiae
+# Resample rate must be 2 X the desired Nyquist
+ResampleRate: 16000
+# SegmentDuration: units=seconds;    
+SegmentDuration: 60
+# SegmentOverlap: units=seconds;
+SegmentOverlap: 0
+
+# Each of these profiles will be analyzed
+# This profile is required for the species-specific recogniser and must have the current name.
+Profiles:
+    PipitSyllable: !UpwardTrackParameters
+        ComponentName: Whip 
+        SpeciesName: AnthusNovaeseelandiae
+        FrameSize: 512
+        FrameStep: 256
+        WindowFunction: HANNING
+        # min and max of the freq band to search
+        MinHertz: 2000          
+        MaxHertz: 7000
+        MinBandwidthHertz: 500
+        MaxBandwidthHertz: 5000
+        DecibelThreshold: 9.0
+
+#################### POST-PROCESSING of EVENTS ###################
+
+# A: First post-processing steps are to combine overlapping/proximal/sequential events 
+#  1: Combine overlapping events
+CombineOverlappingEvents: true
+
+#  2: Combine syllables that possibly belong to the same strophe.
+#     Can also use this to "mop up" events in neighbourhood - these can be removed later. 
+CombinePossibleSyllableSequence: true
+SyllableStartDifference: 0.25
+SyllableHertzGap: 3000
+
+#  B: Filter the events for excess activity in their upper and lower buffer zones
+NeighbourhoodLowerHertzBuffer: 200
+NeighbourhoodUpperHertzBuffer: 0
+NeighbourhoodDbThreshold: 9.0
+
+# C: Options to save results files
+#  4: Available options for saving spectrograms (case-sensitive): [False/Never | True/Always | WhenEventsDetected]
+# "True" is useful when debugging but "WhenEventsDetected" is required for operational use.
+#SaveSonogramImages: True
+SaveSonogramImages: WhenEventsDetected
+
+#  5: Available options for saving data files (case-sensitive): [False/Never | True/Always | WhenEventsDetected]
+SaveIntermediateWavFiles: Never
+SaveIntermediateCsvFiles: false
+
+# 6: DisplayCsvImage is obsolete - ensure it remains set to: false
+DisplayCsvImage: false
+## End section for AnalyzeLongRecording
+
+# Other config files to reference
+HighResolutionIndicesConfig: "../Towsey.Acoustic.HiResIndicesForRecognisers.yml"
+
+...

src/AnalysisConfigFiles/RecognizerConfigFiles/Towsey.BotaurusPoiciloptilus.yml

@@ -9,51 +9,51 @@ SegmentDuration: 60
 SegmentOverlap: 0
 
 # Each of these profiles will be analyzed
+# This profile is required for the species-specific recogniser and must have the current name.
 Profiles:
-    AustBittern: !OnebinTrackParameters
+    BitternSyllable: !OnebinTrackParameters
         ComponentName: Whistle 
         SpeciesName: BotaurusPoiciloptilus
         FrameSize: 512
         FrameStep: 256
         WindowFunction: HANNING
-        BgNoiseThreshold: 0.0
         # min and max of the freq band to search
         MinHertz: 100          
         MaxHertz: 200
         MinDuration: 0.3
         MaxDuration: 1.0
-        DecibelThreshold: 3.0
+        DecibelThreshold: 6.0
 
-#Combine each pair of Boobook syllables as one event
-#CombineProximalSimilarEvents: false
+#################### POST-PROCESSING of EVENTS ###################
+
+# A: First post-processing steps are to combine overlapping/proximal/sequential events 
+#  1: Combine overlapping events
+CombineOverlappingEvents: false
+
+#  2: Combine each pair of Boobook syllables as one event
+#     Can also use this to "mop up" events in neighbourhood - these can be removed later. 
 CombinePossibleSyllableSequence: true
 SyllableStartDifference: 3.0
-SyllableHertzGap: 100
-
-# Common settings
-#Standard: &STANDARD
-#EventThreshold: 0.2
-#BgNoiseThreshold: 3.0
+SyllableHertzGap: 35
 
-# This notation means the a profile has all of the settings that the Standard profile has,
-# however, the DctDuration parameter has been overridden.
-#  <<: *STANDARD
-#  DctDuration: 0.3
+#  B: Filter the events for excess activity in their upper and lower buffer zones
+NeighbourhoodLowerHertzBuffer: 150
+NeighbourhoodUpperHertzBuffer: 400
+NeighbourhoodDbThreshold: 6.0
 
-################################################################################
-# Save intermediate file options (case-sensitive): [False/Never | True/Always | WhenEventsDetected]
-SaveIntermediateWavFiles: Never
-SaveIntermediateCsvFiles: false
-
-# Save spectrogram images: available options (case-sensitive): [False/Never | True/Always | WhenEventsDetected]
+# C: Options to save results files
+#  4: Available options for saving spectrograms (case-sensitive): [False/Never | True/Always | WhenEventsDetected]
 # "True" is useful when debugging but "WhenEventsDetected" is required for operational use.
 #SaveSonogramImages: True
 SaveSonogramImages: WhenEventsDetected
 
-# DisplayCsvImage is obsolete - ensure it remains set to: false
+#  5: Available options for saving data files (case-sensitive): [False/Never | True/Always | WhenEventsDetected]
+SaveIntermediateWavFiles: Never
+SaveIntermediateCsvFiles: false
+
+# 6: DisplayCsvImage is obsolete - ensure it remains set to: false
 DisplayCsvImage: false
 ## End section for AnalyzeLongRecording
 
 # Other config files to reference
 HighResolutionIndicesConfig: "../Towsey.Acoustic.HiResIndicesForRecognisers.yml"
-...

src/AnalysisConfigFiles/RecognizerConfigFiles/Towsey.CisticolaExilis.yml

@@ -0,0 +1,61 @@
+---
+
+# Golden-headed cisticola = Cisticola exilis
+# Resample rate must be 2 X the desired Nyquist
+ResampleRate: 16000
+# SegmentDuration: units=seconds;    
+SegmentDuration: 60
+# SegmentOverlap: units=seconds;
+SegmentOverlap: 0
+
+# Each of these profiles will be analyzed
+# This profile is required for the species-specific recogniser and must have the current name.
+Profiles:
+    CisticolaSyllable: !UpwardTrackParameters
+        ComponentName: Whip 
+        SpeciesName: CisticolaExilis
+        FrameSize: 512
+        FrameStep: 128
+        WindowFunction: HANNING
+        # min and max of the freq band to search
+        MinHertz: 2100          
+        MaxHertz: 3300
+        MinBandwidthHertz: 200
+        MaxBandwidthHertz: 900
+        DecibelThreshold: 6.0
+
+#################### POST-PROCESSING of EVENTS ###################
+
+# A: First post-processing steps are to combine overlapping/proximal/sequential events 
+#  1: Combine overlapping events
+CombineOverlappingEvents: true
+
+#  2: Combine syllables that possibly belong to the same strophe.
+#     Can also use this to "mop up" events in neighbourhood - these can be removed later. 
+CombinePossibleSyllableSequence: true
+SyllableStartDifference: 0.15
+SyllableHertzGap: 500
+
+#  B: Filter the events for excess activity in their upper and lower buffer zones
+NeighbourhoodLowerHertzBuffer: 0
+NeighbourhoodUpperHertzBuffer: 200
+NeighbourhoodDbThreshold: 4.0
+
+# C: Options to save results files
+#  4: Available options for saving spectrograms (case-sensitive): [False/Never | True/Always | WhenEventsDetected]
+# "True" is useful when debugging but "WhenEventsDetected" is required for operational use.
+#SaveSonogramImages: True
+SaveSonogramImages: WhenEventsDetected
+
+#  5: Available options for saving data files (case-sensitive): [False/Never | True/Always | WhenEventsDetected]
+SaveIntermediateWavFiles: Never
+SaveIntermediateCsvFiles: false
+
+# 6: DisplayCsvImage is obsolete - ensure it remains set to: false
+DisplayCsvImage: false
+## End section for AnalyzeLongRecording
+
+# Other config files to reference
+HighResolutionIndicesConfig: "../Towsey.Acoustic.HiResIndicesForRecognisers.yml"
+
+...

src/AnalysisConfigFiles/RecognizerConfigFiles/Towsey.NinoxBoobook.yml

@@ -1,15 +1,13 @@
 ---
 
+# Boobook Owl = Towsey.NinoxBoobook
 # Resample rate must be 2 X the desired Nyquist
 #ResampleRate: 22050
 # SegmentDuration: units=seconds;    
 SegmentDuration: 60
 # SegmentOverlap: units=seconds;
 SegmentOverlap: 0
 
-# Preprocessing of the recording segment
-IgnoreHighAmplitudeClippedRecordingSegments: true
-
 # Each of these profiles will be analyzed
 # This profile is required for the species-specific recogniser and must have the current name.
 Profiles:
@@ -19,7 +17,6 @@ Profiles:
         FrameSize: 1024
         FrameStep: 256
         WindowFunction: HANNING
-        BgNoiseThreshold: 0.0
         # min and max of the freq band to search
         MinHertz: 400          
         MaxHertz: 1100
@@ -31,49 +28,33 @@ Profiles:
 
 # A: First post-processing steps are to combine overlapping/proximal/sequential events 
 #  1: Combine overlapping events
-#CombineOverlappingEvents: false
+CombineOverlappingEvents: true
 
 #  2: Combine each pair of Boobook syllables as one event
 #     Can also use this to "mop up" events in neighbourhood - these can be removed later. 
 CombinePossibleSyllableSequence: true
 SyllableStartDifference: 0.6
 SyllableHertzGap: 350
 
-# B: Select or remove event types.
-#  3: Select wanted event types.
-#SelectEventsOfType: !ChirpEvent
-
-#  4: Remove unwanted event types.
-#RemoveEventsOfType: !ChirpEvent 
-
-# C: Remaining post-processing steps are to filter out over and/or undersized events
-#  5: Filter the events for duration in seconds
-RemoveEventsHavingWrongDuration: true
-
-#  6: Filter the events for bandwidth in Hertz
-RemoveEventsHavingWrongBandwidth: true
-
-#  7: Filter the events for excess activity in upper buffer zone
-RemoveEventsHavingExcessActivityInUpperBufferZone: true
-
-#  8: Filter the events for excess activity in lower buffer zone
-RemoveEventsHavingExcessActivityInLowerBufferZone: true
+#  B: Filter the events for excess activity in their upper and lower buffer zones
+NeighbourhoodLowerHertzBuffer: 150
+NeighbourhoodUpperHertzBuffer: 400
+NeighbourhoodDbThreshold: 9.0
 
 # C: Options to save results files
-#  9: Available options for saving data files (case-sensitive): [False/Never | True/Always | WhenEventsDetected]
-SaveIntermediateWavFiles: Never
-SaveIntermediateCsvFiles: false
-# Available options (case-sensitive): [False/Never | True/Always | WhenEventsDetected]
+#  4: Available options for saving spectrograms (case-sensitive): [False/Never | True/Always | WhenEventsDetected]
 # "True" is useful when debugging but "WhenEventsDetected" is required for operational use.
-
-#  10: Available options for saving 
 #SaveSonogramImages: True
 SaveSonogramImages: WhenEventsDetected
-# DisplayCsvImage is obsolete - ensure it remains set to: false
+
+#  5: Available options for saving data files (case-sensitive): [False/Never | True/Always | WhenEventsDetected]
+SaveIntermediateWavFiles: Never
+SaveIntermediateCsvFiles: false
+
+# 6: DisplayCsvImage is obsolete - ensure it remains set to: false
 DisplayCsvImage: false
 ## End section for AnalyzeLongRecording
 
 # Other config files to reference
-
 HighResolutionIndicesConfig: "../Towsey.Acoustic.HiResIndicesForRecognisers.yml"
 ...