[repo-helper] Configuration Update

.github/dependabot.yml

@@ -6,5 +6,6 @@ updates:
   directory: /
   schedule:
     interval: weekly
+  open-pull-requests-limit: 0
   reviewers:
   - domdfcoding

.github/workflows/python_ci_macos.yml

@@ -18,8 +18,8 @@ permissions:
 
 jobs:
   tests:
-    name: "macos-latest / Python ${{ matrix.config.python-version }}"
-    runs-on: "macos-latest"
+    name: "macos-13 / Python ${{ matrix.config.python-version }}"
+    runs-on: "macos-13"
     continue-on-error: ${{ matrix.config.experimental }}
     env:
       USING_COVERAGE: '3.8'

.pre-commit-config.yaml

@@ -8,7 +8,7 @@ ci:
 
 repos:
  - repo: https://github.com/repo-helper/pyproject-parser
-   rev: v0.9.1
+   rev: v0.11.0
    hooks:
     - id: reformat-pyproject
 
@@ -43,7 +43,7 @@ repos:
     - id: bind-requirements
 
  - repo: https://github.com/domdfcoding/flake8-dunder-all
-   rev: v0.3.1
+   rev: v0.4.1
    hooks:
     - id: ensure-dunder-all
       files: ^contributing/.*\.py$

README.rst

@@ -4,8 +4,8 @@ Contributing Guide
 
 .. start short_desc
 
-**Contributing guide for repo-helper and associated projects**
+**Contributing guide for PyMassSpec and associated projects**
 
 .. end short_desc
 
-View online at https://contributing.repo-helper.uk
+View online at https://contributing-to-pyms.readthedocs.io

contributing/__init__.py

@@ -2,7 +2,7 @@
 #
 #  __init__.py
 """
-Contributing guide for repo-helper and associated projects.
+Contributing guide for PyMassSpec and associated projects.
 """
 #
 #  Copyright © 2020-2021 Dominic Davis-Foster <[email protected]>

doc-source/_templates/base.html

@@ -2,4 +2,5 @@
 {% extends "!base.html" %}
 {% block extrahead %}
 	<link href="{{ pathto("_static/style.css", True) }}" rel="stylesheet" type="text/css">
+	<link rel=icon href=https://pymassspec.github.io/assets/PyMassSpec.ico sizes="48x48" type="image/vnd.microsoft.icon">
 {% endblock %}

doc-source/conf.py

@@ -74,11 +74,18 @@
 def setup(app):
 	# 3rd party
 	from sphinx_toolbox.latex import better_header_layout
+	from sphinxemoji import sphinxemoji
 
 	app.connect("config-inited", lambda app, config: better_header_layout(config))
+	app.connect("build-finished", sphinxemoji.copy_asset_files)
+	app.add_js_file("https://unpkg.com/twemoji@latest/dist/twemoji.min.js")
+	app.add_js_file("twemoji.js")
+	app.add_css_file("twemoji.css")
+	app.add_transform(sphinxemoji.EmojiSubstitutions)
 
 
 nitpicky = True
 del version
 del release
-html_title = "repo-helper Contributing Guide"
+html_title = "PyMassSpec Contributing Guide"
+html_logo = "PyMassSpec_262.png"

doc-source/getting-started.rst

@@ -49,7 +49,7 @@ With bash:
 
 .. code-block:: bash
 
-	(repo-helper) $
+	(PyMassSpec) $
 
 
 .. _GitHub: https://github.com/

doc-source/index.rst

@@ -23,3 +23,7 @@ Contributing Guide
 	documentation
 	building
 	release-process
+
+.. sidebar-links::
+	:caption: Links
+	:github:

formate.toml

@@ -6,21 +6,17 @@ noqa-reformat = 60
 ellipsis-reformat = 70
 squish_stubs = 80
 
-[config]
-indent = "\t"
-line_length = 115
-
 [hooks.yapf]
 priority = 30
 
-[hooks.isort]
-priority = 50
-
 [hooks.yapf.kwargs]
 yapf_style = ".style.yapf"
 
+[hooks.isort]
+priority = 50
+
 [hooks.isort.kwargs]
-indent = "\t\t"
+indent = "		"
 multi_line_output = 8
 import_heading_stdlib = "stdlib"
 import_heading_thirdparty = "3rd party"
@@ -32,4 +28,8 @@ use_parentheses = true
 remove_redundant_aliases = true
 default_section = "THIRDPARTY"
 known_third_party = []
-known_first_party = "contributing"
+known_first_party = [ "contributing",]
+
+[config]
+indent = "	"
+line_length = 115

pyproject.toml

@@ -5,24 +5,23 @@ build-backend = "whey"
 [project]
 name = "contributing"
 version = "2021.0.0"
-description = "Contributing guide for repo-helper and associated projects"
+description = "Contributing guide for PyMassSpec and associated projects"
 readme = "README.rst"
 keywords = []
 dynamic = [ "requires-python", "classifiers", "dependencies",]
 
+[project.license]
+file = "LICENSE"
+
 [[project.authors]]
 name = "Dominic Davis-Foster"
 email = "[email protected]"
 
-
-[project.license]
-file = "LICENSE"
-
 [project.urls]
-Homepage = "https://github.com/repo-helper/contributing"
-"Issue Tracker" = "https://github.com/repo-helper/contributing/issues"
-"Source Code" = "https://github.com/repo-helper/contributing"
-Documentation = "https://contributing.repo-helper.uk"
+Homepage = "https://github.com/PyMassSpec/contributing"
+"Issue Tracker" = "https://github.com/PyMassSpec/contributing/issues"
+"Source Code" = "https://github.com/PyMassSpec/contributing"
+Documentation = "https://contributing-to-pyms.readthedocs.io"
 
 [tool.whey]
 base-classifiers = []
@@ -34,7 +33,7 @@ license-key = "MIT"
 [tool.importcheck]
 
 [tool.sphinx-pyproject]
-github_username = "repo-helper"
+github_username = "PyMassSpec"
 github_repository = "contributing"
 author = "Dominic Davis-Foster"
 project = "contributing"
@@ -54,7 +53,6 @@ extensions = [
     "sphinx.ext.mathjax",
     "sphinxcontrib.extras_require",
     "sphinx.ext.todo",
-    "sphinxemoji.sphinxemoji",
     "notfound.extension",
     "sphinx_copybutton",
     "sphinxcontrib.default_values",
@@ -64,7 +62,6 @@ extensions = [
     "html_section",
     "html_section",
 ]
-sphinxemoji_style = "twemoji"
 gitstamp_fmt = "%d %b %Y"
 templates_path = [ "_templates",]
 html_static_path = [ "_static",]
@@ -124,13 +121,6 @@ show_error_codes = true
 [tool.snippet-fmt]
 directives = [ "code-block",]
 
-[tool.dependency-dash."requirements.txt"]
-order = 10
-
-[tool.dependency-dash."doc-source/requirements.txt"]
-order = 30
-include = false
-
 [tool.snippet-fmt.languages.python]
 reformat = true
 
@@ -140,3 +130,10 @@ reformat = true
 [tool.snippet-fmt.languages.ini]
 
 [tool.snippet-fmt.languages.json]
+
+[tool.dependency-dash."requirements.txt"]
+order = 10
+
+[tool.dependency-dash."doc-source/requirements.txt"]
+order = 30
+include = false

repo_helper.yml

@@ -4,19 +4,20 @@ modname: 'contributing'
 copyright_years: '2020-2021'
 author: 'Dominic Davis-Foster'
 email: '[email protected]'
-username: 'repo-helper'
+username: 'PyMassSpec'
 assignee: 'domdfcoding'
 version: '2021.0.0'
 license: 'MIT'
-short_desc: 'Contributing guide for repo-helper and associated projects'
+short_desc: 'Contributing guide for PyMassSpec and associated projects'
 
 use_whey: True
 docs_fail_on_warning: true
 sphinx_html_theme: furo
 enable_tests: false
 enable_conda: false
 on_pypi: false
-docs_url: https://contributing.repo-helper.uk
+docs_url: https://contributing-to-pyms.readthedocs.io
+preserve_custom_theme: true
 
 python_versions:
  - '3.8'
@@ -25,7 +26,8 @@ sphinx_conf_epilogue:
  - nitpicky = True
  - del version
  - del release
- - html_title = "repo-helper Contributing Guide"
+ - html_title = "PyMassSpec Contributing Guide"
+ - html_logo = "PyMassSpec_262.png"
 
 extra_sphinx_extensions:
  - html_section

tox.ini

@@ -59,13 +59,13 @@ setenv =
     PYTHONDEVMODE=1
     PIP_DISABLE_PIP_VERSION_CHECK=1
     PIP_PREFER_BINARY=1
+    UNSAFE_PYO3_SKIP_VERSION_CHECK=1
 skip_install = True
 changedir = {toxinidir}
 deps =
     build[virtualenv]>=0.3.1
     check-wheel-contents>=0.1.0
-    twine>=3.2.0; python_version < "3.13"
-    twine@git+https://github.com/pypa/twine; python_version >= "3.13"
+    twine>=3.2.0
     cryptography<40; implementation_name == "pypy" and python_version <= "3.7"
 commands =
     python -m build --sdist --wheel "{toxinidir}"
@@ -87,7 +87,7 @@ deps =
     flake8-github-actions>=0.1.0
     flake8-noqa>=1.1.0,<=1.2.2
     flake8-pyi>=20.10.0,<=22.8.0
-    flake8-pytest-style>=1.3.0
+    flake8-pytest-style>=1.3.0,<2
     flake8-quotes>=3.3.0
     flake8-slots>=0.1.0
     flake8-sphinx-links>=0.0.4