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AstroVolume Module

Davide Punzo edited this page May 30, 2018 · 45 revisions

The AstroVolume module provides specilized interface in the 3DSlicer enviroment for:

  • Handling the loading and writing of FITS files

  • MRML nodes that store the data-cube and the FITS keywords in the 3DSlicer object-tree (Data module)


    In the tabular is possibile to modify the fits keywords. Opening the node information menu will list, instead, all the private attributes of the object.
  • The control of the display coordinates


    The spacing and the origin values map the ijk to display tranformation.
  • Histogram (for changing interaction/selection in the plotting view press the key 'S')

  • The control of the 2D color transfer function

  • The display of the Astronomical World Coordinate (WCS) and Data Probing for 2D views

  • The display of Beam information in the XY view

  • The control of the 3D color transfer function


    For more detailed options (e.g., interactively modify the color function), navigate to the Volume Rendering module and here is a link to a video showing how to use multi-volume rendering: https://www.youtube.com/watch?v=gKok44BqC44
  • Tools to convert mask from FITS files (e.g., generated by SoFiA) into segmentations objects and viceversa