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add zstd export to pip install option
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Psy-Fer committed Aug 9, 2023
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Expand Up @@ -66,6 +66,10 @@ blue-crab requires python 3.8 or higher (limitation due to ONT's pod5 library).
python3 -m venv ./blue-crab-venv
source ./blue-crab-venv/bin/activate
python3 -m pip install --upgrade pip

# only if you want zstd support and have installed zstd development libraries for zstd build
export PYSLOW5_ZSTD=1

pip install blue-crab

blue-crab --help
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