Fix a potential crash in the new translucent VdW & licorice code #819
Workflow file for this run
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| name: Qt6 Build Matrix | |
| # Many thanks to Cristian Adam for examples | |
| # e.g. https://github.com/cristianadam/HelloWorld/blob/master/.github/workflows/build_cmake.yml | |
| # https://cristianadam.eu/20191222/using-github-actions-with-c-plus-plus-and-cmake/ | |
| on: [push, pull_request, workflow_dispatch] | |
| env: | |
| QT_VERSION: 6.8.0 | |
| # this is different from MACOSX_DEPLOYMENT_TARGET to prevent build problems | |
| # we set MACOSX_DEPLOYMENT_TARGET later | |
| MACOS_TARGET: 10.15 | |
| FEATURES: -DBUILD_GPL_PLUGINS=ON -DBUILD_MOLEQUEUE=OFF -DWITH_COORDGEN=OFF -DUSE_VTK=ON -DQT_VERSION=6 | |
| jobs: | |
| build: | |
| name: ${{ matrix.config.name }} | |
| runs-on: ${{ matrix.config.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - { | |
| name: "Ubuntu Qt6", artifact: "", | |
| os: ubuntu-latest, | |
| cc: "gcc", cxx: "g++", | |
| build_type: "Release", | |
| cmake_flags: "-G Ninja", | |
| cpack: "", | |
| } | |
| - { | |
| name: "Ubuntu Qt6 AppImage", artifact: "", | |
| os: ubuntu-22.04, | |
| cc: "gcc", cxx: "g++", | |
| build_type: "Release", | |
| cmake_flags: "-G Ninja -DINSTALL_BUNDLE_FILES=ON", | |
| cpack: "", | |
| } | |
| - { | |
| name: "macOS Qt6", artifact: "", | |
| os: macos-latest, | |
| cc: "clang", cxx: "clang++", | |
| build_type: "Release", | |
| cmake_flags: "-G Ninja -DCMAKE_OSX_ARCHITECTURES='arm64;x86_64'", | |
| cpack_flags: "-G DragNDrop", | |
| } | |
| - { | |
| name: "Windows Qt6", artifact: "", | |
| os: windows-latest, | |
| cc: "cl", cxx: "cl", | |
| build_type: "Release", | |
| cmake_flags: "", | |
| build_flags: "-j 2", | |
| cpack_flags: "-G NSIS", | |
| } | |
| steps: | |
| - name: Install Dependencies (Linux) | |
| if: runner.os == 'Linux' | |
| run: | | |
| sudo apt-get -qq update | |
| sudo apt-get -qq install ninja-build libeigen3-dev libboost-all-dev libglew-dev libxml2-dev | |
| - name: Install Dependencies (macOS) | |
| if: runner.os == 'macOS' | |
| run: | | |
| brew install ninja eigen glew | |
| - name: Install Dependencies (Windows) | |
| if: runner.os == 'Windows' | |
| run: choco install ninja | |
| - name: Checkout openchemistry | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: openchemistry/openchemistry | |
| submodules: recursive | |
| - name: Checkout avogadroapp | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: openchemistry/avogadroapp | |
| path: avogadroapp | |
| - name: Checkout avogadrolibs | |
| uses: actions/checkout@v4 | |
| with: | |
| path: avogadrolibs | |
| - name: Install Qt | |
| if: runner.os != 'Windows' | |
| uses: jurplel/install-qt-action@v3 | |
| with: | |
| version: ${{ env.QT_VERSION }} | |
| aqtversion: '==3.1.*' | |
| - name: Install Qt (Windows) | |
| if: runner.os == 'Windows' | |
| uses: jurplel/install-qt-action@v3 | |
| with: | |
| version: ${{ env.QT_VERSION }} | |
| aqtversion: '==3.1.*' | |
| host: windows | |
| arch: win64_msvc2022_64 | |
| - name: Configure MSVC Command Prompt | |
| if: runner.os == 'Windows' | |
| uses: ilammy/msvc-dev-cmd@v1 | |
| with: | |
| arch: x64 | |
| - name: Configure | |
| run: | | |
| if [ ! -d "${{ runner.workspace }}/build" ]; then mkdir "${{ runner.workspace }}/build"; fi | |
| cd "${{ runner.workspace }}/build" | |
| # won't have any effect except on Mac | |
| echo "MACOSX_DEPLOYMENT_TARGET=${{ env.MACOS_TARGET }}" >> $GITHUB_ENV | |
| CC=${{matrix.config.cc}} CXX=${{matrix.config.cxx}} cmake $GITHUB_WORKSPACE ${{env.FEATURES}} -DCMAKE_BUILD_TYPE=${{matrix.config.build_type}} ${{matrix.config.cmake_flags}} | |
| shell: bash | |
| - name: Build | |
| run: | | |
| CC=${{matrix.config.cc}} CXX=${{matrix.config.cxx}} cmake --build . --config ${{matrix.config.build_type}} ${{matrix.config.build_flags}} | |
| shell: bash | |
| working-directory: ${{ runner.workspace }}/build | |
| - name: Run tests | |
| if: matrix.config.os == 'ubuntu-latest' | |
| shell: cmake -P {0} | |
| run: | | |
| include(ProcessorCount) | |
| ProcessorCount(N) | |
| set(ENV{CTEST_OUTPUT_ON_FAILURE} "ON") | |
| set(ENV{ASAN_OPTIONS} "new_delete_type_mismatch=0") | |
| execute_process( | |
| COMMAND ctest -j ${N} | |
| WORKING_DIRECTORY ${{ runner.workspace }}/build/avogadrolibs | |
| RESULT_VARIABLE result | |
| ) | |
| if (NOT result EQUAL 0) | |
| message(FATAL_ERROR "Running tests failed!") | |
| endif() | |
| - name: Upload | |
| if: matrix.config.artifact != 0 | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| path: ${{ runner.workspace }}/build/avogadroapp/Avogadro2*.* | |
| name: ${{ matrix.config.artifact }} | |
| - name: Setup tmate session | |
| if: ${{ failure() }} | |
| uses: mxschmitt/action-tmate@v3 |