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Update changelog
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bittremieux committed Nov 18, 2024
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Expand Up @@ -8,6 +8,7 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),

### Added

- Casanovo-DB mode (`casanovo db_search`) to use Casanovo as a learned score function for sequence database searching (given a FASTA protein database).
- During training, model checkpoints will be saved at the end of each training epoch in addition to the checkpoints saved at the end of every validation run.
- Besides as a local file, model weights can be specified from a URL. Upon initial download, the weights file is cached for future re-use.
- Training and optimizer metrics can now be logged to a CSV file by setting the `log_metrics` config file option to true - the CSV file will be written to under a sub-directory of the output directory named `csv_logs`.
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