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Releases: NeuroDesk/neurodesk-app

Release v1.7.0

06 Dec 05:10
e7f431a
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What's changed:

  • updated QSMxT: v7.2.2
  • add heudiconv 1.3.1
  • add mriqc 24.0.2 20241108
  • add samsrfx v10.003
  • add palmettobug 0.0.1 20241119
  • add neurodock/pydesigner
  • Update dcm2niix version to 20241125
  • changed CVMFS servers
  • added -w workaround for docker on apple silicon into dockerfile
  • add static strace to /opt for container debugging
  • enabled VNC again and fix RDP auto resizing

Release v1.6.1

20 Oct 23:18
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Before installing new version, please first uninstall it by following the uninstall instructions here.

What's new

  • fixed #38, clear cache after closing session
  • fixed #41, set working dir to home if path is invalid
  • fixed #39 run docker rm container in shell env
  • fixed #43, workaround relaunch to keep privilege for child process
  • updated neurodesk play servers
  • use cloudfront distribution only
  • workaround for kernel bug on arm64
  • add ipywidgets ipyvolume jupyterlab_widgets
  • add fsl 6.0.7.14
  • add QSMxT v7.2.1
  • add jupyter-resource-usage plugin
  • disable VNC
  • remove updating of example directory on startup
  • update jupyter-server-proxy
  • add more CVMFS servers
  • added relion 4.0.1.sm61 20240528
  • update aslprep to 0.7.0
  • update deepretinotpy to 1.0.5
  • add quickshear
  • add nighres 1.5.1
  • update bidscoin 4.3.3 and 4.4.0
  • added bart 0.9.00
  • updated QSMxT to 7.1.0
  • Added mrtrix3src (latest version)
  • update VesselBoost to ver 1.0.0 by @KMarshallX in jupyterlab#301
  • add qmrlab
  • added niimath
  • updated fsl to 6.0.7.8
  • update aslprep to 0.7.2
  • update ants to 2.5.3
  • updated spinalcordtoolbox to 6.4
  • Update afni to 24.2.07
  • add dcm2niix
  • add micapipe 0.2.3
  • added brainnetviewer
  • Added brainlifecli
  • update fmriprep to 24.1.0
  • Update dsistudio 2024.06.12
  • add vmtk 1.5.0

Release v1.6.0

29 May 06:26
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What's new:

  • switched remote instances from binderhub to jupyterhub
  • fix invalid label when the default openid unique identifier from aaf has symbols
  • added new CVMFS CDN servers
  • added jupyter_scheduler and ipycanvas
  • updated guacamole version to 1.5.5 and tomcat to 9.0.87
  • added rise extension for presentations
  • fixed brkraw by @stebo85
  • updated mrtrix3 by @stebo85 in
  • updated bidscoin to 4.3.2 by @stebo85
  • updated fmriprep by @stebo85
  • added julia 1.9.4 by @stebo85
  • updated dsi_studio by @stebo85
  • added glmsingle by @stebo85
  • ants 2.5.1 20240429 by @stebo85
  • QSMxT: v6.4.4 by @astewartau

Release v1.5.0

12 Mar 04:57
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What's new:

  • Fixed fsl GUI error, when starting fsl in VNC mode (the USER was not exported)
  • Removed c.ServerApp.root_dir setting because it was causing an error when clicking on the Home button. Now it’s not possible to navigate outside of the homedirectory anymore in the side panel.
  • Switched from singularity to apptainer
  • Added (brkraw) and fixed multiple tools (mrtrix3, julia)
  • Added support for Podman engine
  • Fixed #35
  • Fixed running container after closing session in Windows
  • Use static MAC address for container to fix MATLAB license issue in container
  • View logfile if session init fails
  • Decommissioned altool and used notarytool to notarize MacOS package.

Release v1.4.0

24 Jan 21:52
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  • Fixed fsl GUI error, when starting fsl in VNC mode (the USER was not exported)
  • Removed c.ServerApp.root_dir setting because it was causing an error when clicking on the Home button. Now it’s not possible to navigate outside of the homedirectory anymore in the side panel.
  • Fixed container name conflict when starting a new window.
  • Removed data persistence among instances.
  • Fixed issue #32

Release v1.3.0

28 Nov 10:07
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What's new

  • Fixed a bug where the /proc/cpuinfo file under ARM did not contain a MHz entry, which stopped Matlab from starting up
  • Fixed a bug where the SINGULARITY_BINDPATH was not send in a jupyter notebook file

Release v1.2.1

14 Nov 05:49
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What's changed

  • Fixed server launch arguments formatting to allows network mounts in windows

Release v1.2.0

31 Oct 04:49
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What's new:

  • Fixed a bug in the way we initialized conda in the desktop
  • Created persistent homedirectories in the docker versions

Release v1.1.2

11 Oct 23:48
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What's new:

  • Fixed release in about dialog.
  • Removed brainhack servers

Release v1.1.1

27 Sep 00:09
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What's Changed

  • Update to Neurodesk v2023-09-20
  • Compare NeurodeskApp version in package.json instead of toml file