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Implement interpolation methods from NaturalNeighbours.jl #161

Implement interpolation methods from NaturalNeighbours.jl

Implement interpolation methods from NaturalNeighbours.jl #161

Triggered via pull request April 29, 2024 19:45
Status Failure
Total duration 11m 26s
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5 errors, 1 warning, and 1 notice
Documentation: ../../../.julia/packages/Documenter/pA5Sa/src/utilities/utilities.jl#L44
undefined binding 'TopoPlots.NaturalNeighbourMethod' in `@docs` block in src/general.md:18-25 ```@docs TopoPlots.DelaunayMesh TopoPlots.CloughTocher TopoPlots.SplineInterpolator TopoPlots.ScatteredInterpolationMethod TopoPlots.NaturalNeighbourMethod TopoPlots.NullInterpolator ```
Documentation: ../../../.julia/packages/Documenter/pA5Sa/src/utilities/utilities.jl#L44
failed to run `@example` block in src/interpolator_reference.md:58-103 ```@example 1 using Makie.Random: randsubseq data = Makie.peaks(100) sampling_points = randsubseq(CartesianIndices(data), 0.011) data_slice = data[sampling_points] positions = Point2f.(Tuple.(sampling_points)) interpolators = [ SplineInterpolator(; smoothing = 5) NullInterpolator() DelaunayMesh(); CloughTocher() ScatteredInterpolationMethod(ThinPlate()) ScatteredInterpolationMethod(Shepard(3)); ScatteredInterpolationMethod(Multiquadratic()) ScatteredInterpolationMethod(InverseMultiquadratic()) ScatteredInterpolationMethod(Gaussian()); NaturalNeighboursMethod(Hiyoshi(2)) NaturalNeighboursMethod(Sibson()) NaturalNeighboursMethod(Laplace()); NaturalNeighboursMethod(Farin()) NaturalNeighboursMethod(Sibson(1)) NaturalNeighboursMethod(Nearest()); ] f = Figure(; size = (1000, 1500)) for idx in CartesianIndices(interpolators) interpolation = interpolators[idx] # precompile to get accurate measurements TopoPlots.topoplot( data_slice, positions; contours=true, interpolation=interpolation, labels = string.(1:length(positions)), colorrange=(-1, 1), label_scatter=(markersize=10,), axis=(type=Axis, title="...", aspect=DataAspect(),)) # measure time, to give an idea of what speed to expect from the different interpolators t = @Elapsed ax, pl = TopoPlots.topoplot( f[Tuple(idx)...], data_slice, positions; contours=true, interpolation=interpolation, labels = string.(1:length(positions)), colorrange=(-1, 1), label_scatter=(markersize=10,), axis=(type=Axis, title="$(typeof(interpolation))()",aspect=DataAspect(),)) ax.title = ("$(typeof(interpolation))() - $(round(t, digits=2))s") if interpolation isa Union{NaturalNeighboursMethod, ScatteredInterpolationMethod} ax.title = "$(typeof(interpolation))() - $(round(t, digits=2))s" ax.subtitle = string(typeof(interpolation.method)) end end f ``` exception = ArgumentError: Package Makie not found in current path, maybe you meant `import/using .Makie`. - Otherwise, run `import Pkg; Pkg.add("Makie")` to install the Makie package. Stacktrace: [1] macro expansion @ ./loading.jl:1772 [inlined] [2] macro expansion @ ./lock.jl:267 [inlined] [3] __require(into::Module, mod::Symbol) @ Base ./loading.jl:1753 [4] #invoke_in_world#3 @ ./essentials.jl:926 [inlined] [5] invoke_in_world @ ./essentials.jl:923 [inlined] [6] require(into::Module, mod::Symbol) @ Base ./loading.jl:1746 [7] eval @ ./boot.jl:385 [inlined] [8] #58 @ ~/.julia/packages/Documenter/pA5Sa/src/expander_pipeline.jl:754 [inlined] [9] cd(f::Documenter.var"#58#60"{Module, Expr}, dir::String) @ Base.Filesystem ./file.jl:112 [10] (::Documenter.var"#57#59"{Documenter.Page, Module, Expr})() @ Documenter ~/.julia/packages/Documenter/pA5Sa/src/expander_pipeline.jl:753 [11] (::IOCapture.var"#4#7"{DataType, Documenter.var"#57#59"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})() @ IOCapture ~/.julia/packages/IOCapture/Rzdxd/src/IOCapture.jl:161 [12] with_logstate(f::Function, logstate::Any) @ Base.CoreLogging ./logging.jl:515 [13] with_logger @ ./logging.jl:627 [inlined] [14] capture(f::Documenter.var"#57#59"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer) @ IOCapture ~/.julia/packages/IOCapture/Rzdxd/src/IOCapture.jl:158 [15] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document) @ Documenter ~/.julia/packages/Documenter/pA5Sa/src/expander_pipeline.jl:752
Documentation: ../../../.julia/packages/Documenter/pA5Sa/src/utilities/utilities.jl#L44
Cannot resolve @ref for md"[`Interpolator`](@ref)" in src/general.md. - No docstring found in doc for binding `Main.Interpolator`.
Documentation: ../../../.julia/packages/Documenter/pA5Sa/src/utilities/utilities.jl#L44
1 docstring not included in the manual: TopoPlots.NaturalNeighboursMethod These are docstrings in the checked modules (configured with the modules keyword) that are not included in canonical @docs or @autodocs blocks.
Documentation
Process completed with exit code 1.
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