update SwissProt URL in workflow #45
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| name: Tests for Nix | |
| on: push | |
| jobs: | |
| test: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [macos-latest, ubuntu-latest] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python 3 | |
| uses: actions/setup-python@v1 | |
| with: | |
| python-version: 3.8 | |
| - name: Override database files (these need to be fixed since the test values depend on the version of the dataset used) | |
| run: rm -rf megago/resources && mv functional_tests/resources/ megago/resources/ | |
| - name: Install required dependencies on ${{ matrix.os }} | |
| run: | | |
| python3 -m pip install --upgrade pip | |
| pip3 install -r requirements-dev.txt | |
| pip3 install -U . | |
| - name: Run tests against ${{ matrix.os }} | |
| run: python3 functional_tests/megago-test.py -v -p megago -d ./functional_tests/testdata |