Vtk add field data support #1760
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| name: CI | |
| on: | |
| pull_request: | |
| branches: | |
| - master | |
| # schedule: | |
| # - cron: '0 1 * * *' | |
| workflow_dispatch: | |
| concurrency: | |
| group: CI-${{ github.head_ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| Ubuntu-Cpp-C: | |
| runs-on: ubuntu-latest | |
| name: "Ubuntu C++ & C (${{ matrix.compiler }} / ${{ matrix.mpi }})" | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| compiler: [GCC, CLANG, ICC, ICX] | |
| mpi: [OpenMPI, IntelMPI] | |
| exclude: | |
| # CLANG is not properly supported by Intel, better use LLVMIntel in the future | |
| - compiler: CLANG | |
| mpi: IntelMPI | |
| timeout-minutes: 30 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Install dependencies | |
| run: | | |
| # see https://software.intel.com/content/www/us/en/develop/articles/installing-intel-oneapi-toolkits-via-apt.html#pkgtable | |
| cd /tmp | |
| wget https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB | |
| sudo apt-key add GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB | |
| rm GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB | |
| sudo add-apt-repository "deb https://apt.repos.intel.com/oneapi all main" | |
| sudo apt-get update | |
| sudo apt-get install \ | |
| valgrind \ | |
| clang-11 | |
| - name: Install legacy Intel compiler | |
| if: ${{ matrix.compiler == 'ICC' }} | |
| run: sudo apt-get install intel-oneapi-compiler-dpcpp-cpp-and-cpp-classic | |
| - name: Install Intel compiler | |
| if: ${{ matrix.compiler == 'ICX' }} | |
| run: sudo apt-get install intel-oneapi-compiler-dpcpp-cpp | |
| - name: Install MPI | |
| run: | | |
| if [ ${{ matrix.mpi }} = OpenMPI ]; then | |
| sudo apt-get install libopenmpi-dev openmpi-bin | |
| else | |
| sudo apt-get install intel-oneapi-mpi-devel | |
| fi | |
| - name: Build CoSimIO | |
| run: | | |
| if [ ${{ matrix.compiler }} = GCC ]; then | |
| export CXX=/usr/bin/g++ | |
| export CC=/usr/bin/gcc | |
| elif [ ${{ matrix.compiler }} = CLANG ]; then | |
| export CXX=/usr/bin/clang++-11 | |
| export CC=/usr/bin/clang-11 | |
| elif [ ${{ matrix.compiler }} = ICC ]; then | |
| export CXX=icpc | |
| export CC=icc | |
| elif [ ${{ matrix.compiler }} = ICX ]; then | |
| export CXX=icpx | |
| export CC=icx | |
| else | |
| echo 'Unsupported compiler: ${{ matrix.compiler }}' | |
| exit 1 | |
| fi | |
| if [ ${{ matrix.compiler }} = ICC ] || [ ${{ matrix.compiler }} = ICX ] || [ ${{ matrix.mpi }} = IntelMPI ]; then | |
| source /opt/intel/oneapi/setvars.sh | |
| fi | |
| build_mpi_comm=OFF | |
| if [ ${{ matrix.mpi }} = IntelMPI ]; then | |
| build_mpi_comm=ON | |
| fi | |
| cmake -H"." -B"build" \ | |
| -DCMAKE_BUILD_TYPE="Debug" \ | |
| -DCO_SIM_IO_BUILD_C=ON \ | |
| -DCO_SIM_IO_BUILD_FORTRAN=OFF \ | |
| -DCO_SIM_IO_BUILD_MPI=ON \ | |
| -DCO_SIM_IO_BUILD_MPI_COMMUNICATION=$build_mpi_comm \ | |
| -DCO_SIM_IO_STRICT_COMPILER=ON | |
| cmake --build "build" --target install -- -j2 | |
| - name: Running tests | |
| env: | |
| OMPI_MCA_rmaps_base_oversubscribe: 1 # Allow oversubscription for MPI (needed for OpenMPI >= 3.0) | |
| run: | | |
| export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin | |
| export PATH=${PATH}:${GITHUB_WORKSPACE}/bin # required for IntelMPI | |
| export PATH=${PATH}:${GITHUB_WORKSPACE}/bin/tests_c_mpi # required for IntelMPI | |
| if [ ${{ matrix.compiler }} = ICC ] || [ ${{ matrix.compiler }} = ICX ] || [ ${{ matrix.mpi }} = IntelMPI ]; then | |
| source /opt/intel/oneapi/setvars.sh | |
| fi | |
| cd build | |
| ctest -T memcheck --output-on-failure | |
| - uses: actions/upload-artifact@v2 | |
| if: failure() | |
| with: | |
| name: "CTest Log Ubuntu C++ & C (${{ matrix.compiler }}-${{ matrix.mpi }})" | |
| path: ${{ github.workspace }}/build/Testing/ | |
| Ubuntu-Python: | |
| runs-on: ubuntu-latest | |
| name: Ubuntu Python ${{ matrix.python-version }} (${{ matrix.compiler }}) | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.8", "3.9", "3.10", "3.11"] | |
| compiler: [GCC, ICC] | |
| timeout-minutes: 15 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Install Intel compiler | |
| if: ${{ matrix.compiler == 'ICC' }} | |
| run: | | |
| # see https://software.intel.com/content/www/us/en/develop/articles/installing-intel-oneapi-toolkits-via-apt.html#pkgtable | |
| cd /tmp | |
| wget https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB | |
| sudo apt-key add GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB | |
| rm GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB | |
| sudo add-apt-repository "deb https://apt.repos.intel.com/oneapi all main" | |
| sudo apt-get update | |
| sudo apt-get install intel-oneapi-compiler-dpcpp-cpp-and-cpp-classic | |
| - name: Install MPI | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install libopenmpi-dev openmpi-bin | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Build CoSimIO | |
| run: | | |
| cmake -H"." -B"build" \ | |
| -DCMAKE_BUILD_TYPE="Debug" \ | |
| -DCO_SIM_IO_BUILD_PYTHON=ON \ | |
| -DCO_SIM_IO_BUILD_MPI=ON \ | |
| -DPYBIND11_PYTHON_VERSION=${{ matrix.python-version }} \ | |
| -DCO_SIM_IO_STRICT_COMPILER=ON | |
| cmake --build "build" --target install -- -j2 | |
| - name: Running tests | |
| run: | | |
| if [ ${{ matrix.compiler }} = ICC ]; then | |
| source /opt/intel/oneapi/setvars.sh | |
| fi | |
| export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin | |
| export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin | |
| cd tests | |
| # TODO delete build dir to make sure the linking etc works correctly? | |
| python run_python_tests.py | |
| - name: Running MPI tests | |
| run: | | |
| if [ ${{ matrix.compiler }} = ICC ]; then | |
| source /opt/intel/oneapi/setvars.sh | |
| fi | |
| export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin | |
| export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin | |
| cd tests | |
| #TODO run the tests... | |
| # TODO delete build dir to make sure the linking etc works correctly? | |
| # python run_python_tests.py | |
| MacOS-Cpp-C: | |
| runs-on: macOS-latest | |
| name: MacOS C++ & C | |
| timeout-minutes: 15 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Build CoSimIO | |
| run: | | |
| cmake -H"." -B"build" \ | |
| -DCMAKE_BUILD_TYPE="Debug" \ | |
| -DCO_SIM_IO_BUILD_C=ON \ | |
| -DCO_SIM_IO_STRICT_COMPILER=ON | |
| cmake --build "build" --target install -- -j3 | |
| - name: Running tests | |
| run: | | |
| cd build | |
| ctest --output-on-failure | |
| MacOS-Python: | |
| runs-on: macOS-latest | |
| name: MacOS Python ${{ matrix.python-version }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.8", "3.9", "3.10", "3.11"] | |
| timeout-minutes: 15 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Build CoSimIO | |
| run: | | |
| cmake -H"." -B"build" \ | |
| -DCMAKE_BUILD_TYPE="Debug" \ | |
| -DCO_SIM_IO_BUILD_PYTHON=ON \ | |
| -DPYBIND11_PYTHON_VERSION=${{ matrix.python-version }} \ | |
| -DCO_SIM_IO_STRICT_COMPILER=ON | |
| cmake --build "build" --target install -- -j3 | |
| - name: Running tests | |
| run: | | |
| export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin | |
| export DYLD_LIBRARY_PATH=${DYLD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin | |
| cd tests | |
| # TODO delete build dir to make sure the linking etc works correctly? | |
| python run_python_tests.py | |
| Windows-Cpp-C: | |
| runs-on: windows-latest | |
| name: Windows C++ & C | |
| timeout-minutes: 15 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Build CoSimIO | |
| shell: cmd | |
| run: | | |
| call "%ProgramFiles%\Microsoft Visual Studio\2022\Enterprise\VC\Auxiliary\Build\vcvarsall.bat" x64 || goto :error | |
| set CC=cl.exe | |
| set CXX=cl.exe | |
| cmake ^ | |
| -G"Visual Studio 17 2022" ^ | |
| -H"." ^ | |
| -B"build" ^ | |
| -DCMAKE_BUILD_TYPE="Debug" ^ | |
| -DCO_SIM_IO_BUILD_C=ON ^ | |
| -DCO_SIM_IO_STRICT_COMPILER=ON || goto :error | |
| cmake --build "build" --target install -- /p:Platform=x64 || goto :error | |
| goto :EOF | |
| :error | |
| echo Failed with error #%errorlevel%. | |
| exit /b %errorlevel% | |
| - name: Running tests | |
| shell: cmd | |
| run: | | |
| set PATH=%PATH%;%GITHUB_WORKSPACE%/bin | |
| cd build | |
| ctest -C Debug --output-on-failure | |
| Windows-Python: | |
| runs-on: windows-latest | |
| name: Windows Python ${{ matrix.python-version }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.8", "3.9", "3.10", "3.11"] | |
| timeout-minutes: 15 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Installing dependencies | |
| shell: cmd | |
| run: | | |
| pip install numpy | |
| - name: Build CoSimIO | |
| shell: cmd | |
| run: | | |
| call "%ProgramFiles%\Microsoft Visual Studio\2022\Enterprise\VC\Auxiliary\Build\vcvarsall.bat" x64 || goto :error | |
| set CC=cl.exe | |
| set CXX=cl.exe | |
| cmake ^ | |
| -G"Visual Studio 17 2022" ^ | |
| -H"." ^ | |
| -B"build" ^ | |
| -DCO_SIM_IO_BUILD_PYTHON=ON ^ | |
| -DCO_SIM_IO_STRICT_COMPILER=ON || goto :error | |
| cmake --build "build" --target install -- /p:Platform=x64 || goto :error | |
| goto :EOF | |
| :error | |
| echo Failed with error #%errorlevel%. | |
| exit /b %errorlevel% | |
| - name: Running tests | |
| env: | |
| PYTHON_CMD: python # for the tests (subprocess) | |
| shell: cmd | |
| run: | | |
| set PYTHONPATH=%PYTHONPATH%;%GITHUB_WORKSPACE%/bin | |
| cd tests | |
| rem TODO delete build dir to make sure the linking etc works correctly? | |
| python run_python_tests.py | |
| CentOS-7: | |
| runs-on: ubuntu-latest | |
| name: CentOS 7 | |
| container: | |
| image: kratosmultiphysics/kratos-image-ci-centos7:latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Build CoSimIO | |
| run: | | |
| cmake -H"." -B"build" \ | |
| -DCMAKE_BUILD_TYPE="Debug" \ | |
| -DCO_SIM_IO_BUILD_C=ON \ | |
| -DCO_SIM_IO_BUILD_PYTHON=ON \ | |
| -DCO_SIM_IO_STRICT_COMPILER=ON | |
| cmake --build "build" --target install -- -j2 | |
| - name: Running tests (Ctest) | |
| run: | | |
| cd build | |
| ctest --output-on-failure | |
| - name: Running tests (Python) | |
| run: | | |
| export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin | |
| export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin | |
| cd tests | |
| # TODO delete build dir to make sure the linking etc works correctly? (Needs to be done after running CTests) | |
| python3.8 run_python_tests.py | |
| Ubuntu-old-CMake: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Setup cmake | |
| uses: jwlawson/[email protected] | |
| with: | |
| cmake-version: '2.8.x' | |
| - name: Use cmake | |
| run: cmake --version | |
| - name: Install MPI | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install libopenmpi-dev openmpi-bin | |
| - uses: actions/checkout@v4 | |
| - name: Build CoSimIO | |
| run: | | |
| cmake -H"." -B"build" \ | |
| -DCMAKE_BUILD_TYPE="Debug" \ | |
| -DCO_SIM_IO_BUILD_C=ON \ | |
| -DCO_SIM_IO_BUILD_PYTHON=OFF \ | |
| -DCO_SIM_IO_BUILD_TESTING=OFF \ | |
| -DCO_SIM_IO_BUILD_MPI=ON \ | |
| -DCO_SIM_IO_STRICT_COMPILER=ON | |
| cmake --build "build" --target install -- -j2 |