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Add TemporalBrains dataset #222

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merged 14 commits into from
Oct 11, 2023

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aurorarossi
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This PR adds the TemporalBrains dataset, a collection of temporal brain networks of 1000 subjects obtained from resting-state fMRI data.

src/datasets/graphs/temporalbrains.jl Outdated Show resolved Hide resolved
src/datasets/graphs/temporalbrains.jl Outdated Show resolved Hide resolved

The number of nodes is fixed for each of the 27 snapshots at 102, instead the edges change over time.

Each node feature, representing its average activation at each snapshot, is contained in `node_data`.
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This is not cleat to me. The average activation in the window preceding the snapshot?

@CarloLucibello
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Looks good, but see Documenter and julia 1.6 CI failures

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codecov-commenter commented Oct 11, 2023

Codecov Report

Merging #222 (777b109) into master (60a2f05) will decrease coverage by 0.65%.
The diff coverage is 11.36%.

@@            Coverage Diff             @@
##           master     #222      +/-   ##
==========================================
- Coverage   47.26%   46.61%   -0.65%     
==========================================
  Files          48       49       +1     
  Lines        2410     2454      +44     
==========================================
+ Hits         1139     1144       +5     
- Misses       1271     1310      +39     
Files Coverage Δ
src/MLDatasets.jl 100.00% <100.00%> (ø)
src/datasets/graphs/temporalbrains.jl 9.30% <9.30%> (ø)

@CarloLucibello CarloLucibello merged commit c4188ab into JuliaML:master Oct 11, 2023
6 of 7 checks passed
@aurorarossi aurorarossi deleted the add-temporalbrainnetworks branch October 11, 2023 09:20
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3 participants