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Re-haul and implement a more generic read #652

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merged 18 commits into from
Sep 2, 2020
Merged

Re-haul and implement a more generic read #652

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e9fb1c2
add separate tests for HDF5ReferenceObj
kleinhenz Aug 25, 2020
2a9a664
support H5T_REFERENCE in get_mem_compatible_jl_type
kleinhenz Aug 26, 2020
1be00e4
wip on generic read
kleinhenz Aug 26, 2020
3253219
use generic read
kleinhenz Aug 26, 2020
cbf489b
comment out failing test
kleinhenz Aug 26, 2020
a96f4f2
remove unused
kleinhenz Aug 26, 2020
96a3691
add test for reading custom struct
kleinhenz Aug 26, 2020
a6a1678
check that type we are reading into is concrete
kleinhenz Aug 26, 2020
976dc45
add convenience methods for typed reads
kleinhenz Aug 26, 2020
79d71d2
wrap h5s_get_select_npoints
kleinhenz Aug 12, 2020
08e1f54
allow selecting hyperslab of dataspace
kleinhenz Aug 12, 2020
6ba3e83
support hyperslabs in generic read function
kleinhenz Aug 26, 2020
15f4e96
replace filter of tuple with _dropint for compatibility
kleinhenz Aug 26, 2020
ece0dcd
add tests for hyperslab indexing of non-scalar types
kleinhenz Aug 26, 2020
5f0f3af
whitespace
kleinhenz Aug 29, 2020
2b0b02b
use datatype show method when printing error
kleinhenz Aug 29, 2020
85a2e59
type constrain signature of get_(mem_compatible)_jl_type
kleinhenz Aug 29, 2020
94e33a6
replace _dropint by filter(f, tuple)
kleinhenz Aug 31, 2020
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2 changes: 2 additions & 0 deletions Project.toml
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Original file line number Diff line number Diff line change
Expand Up @@ -4,13 +4,15 @@ version = "0.13.5"

[deps]
Blosc = "a74b3585-a348-5f62-a45c-50e91977d574"
Compat = "34da2185-b29b-5c13-b0c7-acf172513d20"
HDF5_jll = "0234f1f7-429e-5d53-9886-15a909be8d59"
Libdl = "8f399da3-3557-5675-b5ff-fb832c97cbdb"
Mmap = "a63ad114-7e13-5084-954f-fe012c677804"
Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"

[compat]
Blosc = "0.5.1, 0.6, 0.7"
Compat = "3.1.0"
HDF5_jll = "1.10.5"
julia = "1.3"

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