Fixed compilation error when compiling the library with OpenMP enabled.

IlyaGrebnov · Mar 3, 2024 · 1913652 · 1913652
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commit 1913652
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Showing 5 changed files with 12 additions and 7 deletions.
diff --git a/CHANGES b/CHANGES
@@ -1,3 +1,6 @@
+Changes in 2.7.6 (March 3, 2024)
+- Fixed compilation error when compiling the library with OpenMP enabled.
+
 Changes in 2.7.5 (February 26, 2024)
 - Improved performance of suffix array and burrows wheeler transform construction on degenerate inputs.
 

diff --git a/CMakeLists.txt b/CMakeLists.txt
@@ -1,6 +1,6 @@
 cmake_minimum_required(VERSION 3.10)
 
-project(libsais VERSION 2.7.5 LANGUAGES C DESCRIPTION "libsais is a library for linear time suffix array, longest common prefix array and burrows wheeler transform construction based on induced sorting algorithm.")
+project(libsais VERSION 2.7.6 LANGUAGES C DESCRIPTION "libsais is a library for linear time suffix array, longest common prefix array and burrows wheeler transform construction based on induced sorting algorithm.")
 
 set(CMAKE_C_STANDARD 99)
 set(CMAKE_C_STANDARD_REQUIRED ON)

diff --git a/README.md b/README.md
@@ -23,6 +23,8 @@ The libsais provides simple C99 API to construct suffix array and Burrows-Wheele
 The libsais is released under the [Apache License Version 2.0](LICENSE "Apache license")
 
 ## Changes
+* March 3, 2024 (2.7.6)
+  * Fixed compilation error when compiling the library with OpenMP enabled.
 * February 26, 2024 (2.7.5)
   * Improved performance of suffix array and burrows wheeler transform construction on degenerate inputs.
 * February 23, 2024 (2.7.4)

diff --git a/VERSION b/VERSION
@@ -1 +1 @@
-2.7.5
+2.7.6
diff --git a/src/libsais64.c b/src/libsais64.c
@@ -6769,8 +6769,8 @@ int64_t libsais64_omp(const uint8_t * T, int64_t * SA, int64_t n, int64_t fs, in
 
         if (index >= 0)
         {
-            libsais64_convert_inplace_32u_to_64u_omp((uint32_t *)SA, (uint64_t *)SA, n, threads);
-            if (freq != NULL) { libsais64_convert_inplace_32u_to_64u_omp((uint32_t *)freq, (uint64_t *)freq, ALPHABET_SIZE, threads); }
+            libsais64_convert_inplace_32u_to_64u_omp((uint32_t *)SA, n, threads);
+            if (freq != NULL) { libsais64_convert_inplace_32u_to_64u_omp((uint32_t *)freq, ALPHABET_SIZE, threads); }
         }
 
         return index;
@@ -6801,7 +6801,7 @@ int64_t libsais64_bwt_omp(const uint8_t * T, uint8_t * U, int64_t * A, int64_t n
 
         if (index >= 0)
         {
-            if (freq != NULL) { libsais64_convert_inplace_32u_to_64u_omp((uint32_t *)freq, (uint64_t *)freq, ALPHABET_SIZE, threads); }
+            if (freq != NULL) { libsais64_convert_inplace_32u_to_64u_omp((uint32_t *)freq, ALPHABET_SIZE, threads); }
         }
 
         return index;
@@ -6843,8 +6843,8 @@ int64_t libsais64_bwt_aux_omp(const uint8_t * T, uint8_t * U, int64_t * A, int64
 
         if (index >= 0)
         {
-            libsais64_convert_inplace_32u_to_64u_omp((uint32_t *)I, (uint64_t *)I, 1 + ((n - 1) / r), threads);
-            if (freq != NULL) { libsais64_convert_inplace_32u_to_64u_omp((uint32_t *)freq, (uint64_t *)freq, ALPHABET_SIZE, threads); }
+            libsais64_convert_inplace_32u_to_64u_omp((uint32_t *)I, 1 + ((n - 1) / r), threads);
+            if (freq != NULL) { libsais64_convert_inplace_32u_to_64u_omp((uint32_t *)freq, ALPHABET_SIZE, threads); }
         }
 
         return index;