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[Feature request]: incorporate update / init capabilities into flepimop CLI #355

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pearsonca opened this issue Oct 22, 2024 · 0 comments
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batch Relating to batch processing. enhancement Request for improvement or addition of new feature(s). meta/workflow Relating to CI / issue templates / testing frameworks / etc. operations Refers to specific epi modeling objectives or scenario modeling goals.

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@pearsonca
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pearsonca commented Oct 22, 2024

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batch, enhancement, meta/workflow, operations

Priority Label

medium priority

Is your feature request related to a problem? Please describe.

Getting consistent environment for multiple users to replicate (or independently run) jobs.

Is your feature request related to a new application, scenario round, pathogen? Please describe.

No response

Describe the solution you'd like

See #330 and comments against #329. Depends on merge of #329 and #336

Desire support for command line actions that handle:

  • update / upgrade of flepimop, using syntax flepimop update or similar
  • initializing of a flepimop project directory / environment (activating environment variables, HPC modules, etc) at the start of some action, using syntax like flepimop init
@pearsonca pearsonca added this to the Under 1Hr New Users! milestone Oct 22, 2024
@pearsonca pearsonca added enhancement Request for improvement or addition of new feature(s). batch Relating to batch processing. operations Refers to specific epi modeling objectives or scenario modeling goals. meta/workflow Relating to CI / issue templates / testing frameworks / etc. labels Oct 22, 2024
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Labels
batch Relating to batch processing. enhancement Request for improvement or addition of new feature(s). meta/workflow Relating to CI / issue templates / testing frameworks / etc. operations Refers to specific epi modeling objectives or scenario modeling goals.
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