v0.6.1

Review installation

v0.5.1

Docs update
Fixes issue with pre-processing files for EVM
Adds CLI parameter for pre-trained models for CodingQuarry, GlimmerHMM, and SNAP

v0.5.0

Homology module can be used without csv_annotations
Docs update
Adds prediction module initial version

What's Changed

• Prediction module by @ljyanesm in #14

Full Changelog: v0.4.6...v0.5.0

v0.4.6

Use CSI indices by default to deal with large genomes
Provide a fai index to portcullis
Set the default orf caller to prodigal

v0.4.5

Allow setting short read indexing tasks resources using ei_annotation.wf_align.short_read_indexing_resources

v0.4.4

Allows specifying resource requirements for sanitation workflow

v0.4.2

Spaln maps files as protein only, instead of using its built-in auto-detection mechanism.

Version 0.4.1

Collates Mikado's default coding table and usage of ATG as only stop codon.

Version 0.4.0

Now accepting coding table in transcriptome pipeline, and protein only evidence in homology pipeline.

Version 0.3.0

v0.3.0

Bump version: 0.2.3 → 0.3.0