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Centers for Disease Control and Prevention

CDC's collaborative software projects to protect America from health, safety, and security threats, both foreign and in the U.S.

CDCGov Organization

This is CDC's GitHub organization for collaborating on open source projects. More information on CDC's open collaboration projects is available at openCDC.

Check out our Open Source Practices and please suggest any ideas for improvement by sending a pull request.

Check out a portal of all the projects hosted in the CDCGov domain. (thanks to Tony Boyles)

If you would like to create a new project, please complete this form logging in with your CDC credentials.

If you would like to join the CDCGov organization, or would like to suggest some others to join, please drop an issue into the template repo.

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  1. cdcgov.github.io cdcgov.github.io Public

    Portal site for all CDCgov projects, https://cdcgov.github.io

    HTML 20 14

  2. template template Public template

    Template repository with rules, practices, and privacy, license, records notices to help people use the CDCgov GitHub organization.

    32 39

Repositories

Showing 10 of 405 repositories
  • forecasttools Public

    R tools for short-term forecasting

    CDCgov/forecasttools’s past year of commit activity
    R 2 Apache-2.0 0 2 2 Updated Nov 16, 2024
  • cfa-actions Public

    GitHub Actions by CDC's CFA team

    CDCgov/cfa-actions’s past year of commit activity
    Python 4 0 4 1 Updated Nov 16, 2024
  • phoenix Public

    🔥🐦🔥PHoeNIx: A short-read pipeline for healthcare-associated and antimicrobial resistant pathogens

    CDCgov/phoenix’s past year of commit activity
    Python 59 Apache-2.0 18 9 2 Updated Nov 16, 2024
  • pyrenew-hew Public

    Models and infrastructure for forecasting COVID-19 and Flu hospitalizations using wastewater data with PyRenew

    CDCgov/pyrenew-hew’s past year of commit activity
    Python 4 Apache-2.0 0 40 3 Updated Nov 16, 2024
  • ReportVision Public

    Intelligent Data Workflow Automation

    CDCgov/ReportVision’s past year of commit activity
    TypeScript 1 Apache-2.0 2 59 7 Updated Nov 15, 2024
  • RecordLinker Public

    The RecordLinker is a service that links records from two datasets based on a set of common attributes. The service is designed to be used in a variety of public health contexts, such as linking patient records from different sources or linking records from different public health surveillance systems.

    CDCgov/RecordLinker’s past year of commit activity
    Python 2 Apache-2.0 0 16 5 Updated Nov 15, 2024
  • CDCgov/scenarios-hpc-azure’s past year of commit activity
    Python 0 Apache-2.0 0 3 1 Updated Nov 15, 2024
  • trusted-intermediary Public

    Bringing together healthcare providers by reducing the connection burden.

    CDCgov/trusted-intermediary’s past year of commit activity
    Groovy 11 Apache-2.0 5 177 4 Updated Nov 15, 2024
  • covid19-forecast-hub Public

    A repository run by the US CDC to collect forecast data for the weekly new COVID-19 hospitalizations.

    CDCgov/covid19-forecast-hub’s past year of commit activity
    R 2 Apache-2.0 1 7 3 Updated Nov 15, 2024
  • eMKF Public
    CDCgov/eMKF’s past year of commit activity
    SAS 2 Apache-2.0 1 0 0 Updated Nov 15, 2024