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Turn compilation formatting error into warning (#93)
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* Turn compilation formatting error into warning

* Bump patch

* Bump again

* Bump again
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almahmoud authored Feb 21, 2024
1 parent 4f4827e commit 712b241
Showing 1 changed file with 4 additions and 3 deletions.
7 changes: 4 additions & 3 deletions Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -21,7 +21,7 @@ ARG BIOCONDUCTOR_VERSION=3.19
##### IMPORTANT ########
## The PATCH version number should be incremented each time
## there is a change in the Dockerfile.
ARG BIOCONDUCTOR_PATCH=20
ARG BIOCONDUCTOR_PATCH=21

ARG BIOCONDUCTOR_DOCKER_VERSION=${BIOCONDUCTOR_VERSION}.${BIOCONDUCTOR_PATCH}

Expand All @@ -44,7 +44,8 @@ RUN bash /tmp/install_bioc_sysdeps.sh $BIOCONDUCTOR_VERSION \
&& echo BIOCONDUCTOR_DOCKER_VERSION=${BIOCONDUCTOR_DOCKER_VERSION} >> /usr/local/lib/R/etc/Renviron.site \
&& echo 'LIBSBML_CFLAGS="-I/usr/include"' >> /usr/local/lib/R/etc/Renviron.site \
&& echo 'LIBSBML_LIBS="-lsbml"' >> /usr/local/lib/R/etc/Renviron.site \
&& rm -rf Renviron.bioc
&& rm -rf Renviron.bioc \
&& sed -i 's/-Werror=format-security/-Wformat-security/g' /usr/local/lib/R/etc/Makeconf

ARG TARGETARCH
ENV TARGETARCH=${TARGETARCH:-amd64}
Expand All @@ -62,7 +63,7 @@ LABEL name="bioconductor/bioconductor_docker" \

# Reset args in last layer
ARG BIOCONDUCTOR_VERSION=3.19
ARG BIOCONDUCTOR_PATCH=20
ARG BIOCONDUCTOR_PATCH=21
ARG BIOCONDUCTOR_DOCKER_VERSION=${BIOCONDUCTOR_VERSION}.${BIOCONDUCTOR_PATCH}

# Set automatically when building with --platform
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