Skip to content

Tweaks for new building jobs #185

Tweaks for new building jobs

Tweaks for new building jobs #185

Triggered via push December 19, 2024 17:37
Status Failure
Total duration 1h 0m 23s
Billable time 33m
Artifacts
Matrix: build-amd64
Matrix: build-arm64
Matrix: merge
Fit to window
Zoom out
Zoom in

Annotations

9 errors and 7 warnings
build-amd64 (rocker/shiny, devel, shiny)
buildx failed with: ERROR: failed to solve: process "/bin/sh -c bash /tmp/install_bioc_sysdeps.sh $BIOCONDUCTOR_VERSION && echo \"R_LIBS=/usr/local/lib/R/host-site-library:\\${R_LIBS}\" > /usr/local/lib/R/etc/Renviron.site && curl -OL http://bioconductor.org/checkResults/devel/bioc-LATEST/Renviron.bioc && sed -i '/^IS_BIOC_BUILD_MACHINE/d' Renviron.bioc && cat Renviron.bioc | grep -o '^[^#]*' | sed 's/export //g' >>/etc/environment && cat Renviron.bioc >> /usr/local/lib/R/etc/Renviron.site && echo BIOCONDUCTOR_VERSION=${BIOCONDUCTOR_VERSION} >> /usr/local/lib/R/etc/Renviron.site && echo BIOCONDUCTOR_DOCKER_VERSION=${BIOCONDUCTOR_DOCKER_VERSION} >> /usr/local/lib/R/etc/Renviron.site && echo 'LIBSBML_CFLAGS=\"-I/usr/include\"' >> /usr/local/lib/R/etc/Renviron.site && echo 'LIBSBML_LIBS=\"-lsbml\"' >> /usr/local/lib/R/etc/Renviron.site && rm -rf Renviron.bioc && sed -i 's/-Werror=format-security/-Wformat-security/g' /usr/local/lib/R/etc/Makeconf" did not complete successfully: exit code: 2
build-arm64 (ghcr.io/bioconductor/rocker-rstudio, devel-arm64, bioconductor_docker)
buildx failed with: ERROR: failed to solve: failed to push Bioconductor/bioconductor_docker: failed to do request: Head "https://Bioconductor/v2/bioconductor_docker/blobs/sha256:37ef03fc13d52755670399dc6f920ae9ad2523fd78a5b14fc729114de9472866": dial tcp: lookup Bioconductor on 168.63.129.16:53: no such host
build-amd64 (ghcr.io/bioconductor/rocker-rstudio, devel-amd64, bioconductor_docker)
buildx failed with: ERROR: failed to solve: failed to push Bioconductor/bioconductor_docker: failed to do request: Head "https://Bioconductor/v2/bioconductor_docker/blobs/sha256:b5970e033122161702ad99d22ff6c5be76191635066d653323ec9cf0e7936e70": dial tcp: lookup Bioconductor on 168.63.129.16:53: no such host
build-amd64 (ghcr.io/bioconductor/rocker-r-ver, devel-amd64, r-ver)
buildx failed with: ERROR: failed to solve: failed to push Bioconductor/r-ver: failed to do request: Head "https://Bioconductor/v2/r-ver/blobs/sha256:9d331dac3387d28f8116d26bd5961101e5a7534bba72129e0dc2a01792d4a4ab": dial tcp: lookup Bioconductor on 168.63.129.16:53: no such host
build-amd64 (ghcr.io/bioconductor/rocker-cuda, devel-amd64, cuda)
buildx failed with: ERROR: failed to solve: failed to push Bioconductor/cuda: failed to do request: Head "https://Bioconductor/v2/cuda/blobs/sha256:3a14a9b2016b015140091235d5c388249caa67bee8bc0a6d8802725d86079043": dial tcp: lookup Bioconductor on 168.63.129.16:53: no such host
build-arm64 (ghcr.io/bioconductor/rocker-r-ver, devel-arm64, r-ver)
buildx failed with: ERROR: failed to solve: failed to push Bioconductor/r-ver: failed to do request: Head "https://Bioconductor/v2/r-ver/blobs/sha256:09a50a35419e8bb8e328dc59e142c9e4a5c58fe6741a4572ee2cfc5d08a23222": dial tcp: lookup Bioconductor on 168.63.129.16:53: no such host
build-amd64 (rocker/tidyverse, devel, tidyverse)
buildx failed with: ERROR: failed to solve: failed to push Bioconductor/tidyverse: failed to do request: Head "https://Bioconductor/v2/tidyverse/blobs/sha256:ccf9130b96fdbd7b03410d77b24515482f2e0138348fddf468ae7133dbe7f9ca": dial tcp: lookup Bioconductor on 168.63.129.16:53: no such host
build-amd64 (ghcr.io/bioconductor/rocker-ml, devel-amd64, ml)
buildx failed with: ERROR: failed to solve: failed to push Bioconductor/ml: failed to do request: Head "https://Bioconductor/v2/ml/blobs/sha256:367e3cee2613fb955406d41d1bc62771ddb2e489237e29e2930ba57007395644": dial tcp: lookup Bioconductor on 168.63.129.16:53: no such host
build-amd64 (ghcr.io/bioconductor/rocker-ml-verse, devel-amd64, ml-verse)
buildx failed with: ERROR: failed to solve: failed to push Bioconductor/ml-verse: failed to do request: Head "https://Bioconductor/v2/ml-verse/blobs/sha256:bed791ac19b8885cdb071777eaec2d9d799044ade9c60d876b6b951ebe0ab27c": dial tcp: lookup Bioconductor on 168.63.129.16:53: no such host
build-amd64 (rocker/shiny, devel, shiny)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
build-amd64 (ghcr.io/bioconductor/rocker-rstudio, devel-amd64, bioconductor_docker)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
build-amd64 (ghcr.io/bioconductor/rocker-r-ver, devel-amd64, r-ver)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
build-amd64 (ghcr.io/bioconductor/rocker-cuda, devel-amd64, cuda)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
build-amd64 (rocker/tidyverse, devel, tidyverse)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
build-amd64 (ghcr.io/bioconductor/rocker-ml, devel-amd64, ml)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
build-amd64 (ghcr.io/bioconductor/rocker-ml-verse, devel-amd64, ml-verse)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636