Releases: BioJulia/SequenceVariation.jl
Releases · BioJulia/SequenceVariation.jl
v0.2.2
SequenceVariation v0.2.2
Closed issues:
- Multiple
Substitution
s doesn't invalidateHaplotype
(#36)
Merged pull requests:
- Fix validation for Haplotypes (#37) (@MillironX)
- Release v0.2.2 (#38) (@MillironX)
v0.2.1
SequenceVariation v0.2.1
Merged pull requests:
- Add
translate
functionality for haplotypes (#31) (@MillironX) - Better error descriptions (#34) (@MillironX)
- Release v0.2.1 (#35) (@MillironX)
v0.2.0
SequenceVariation v0.2.0
Merged pull requests:
- Organize/stylize code and docs (#28) (@MillironX)
- Rename
Variant
toHaplotype
(#29) (@MillironX) - Refactor
reconstruct
function (#30) (@MillironX) - Add
isless
forEdit
andVariation
(#32) (@MillironX) - Release v0.2.0 (#33) (@MillironX)
v0.1.4
SequenceVariation v0.1.4
Closed issues:
- Soft clips cause invalid Variants (#25)
Merged pull requests:
- Fix softclips causing Variant construction errors (#26) (@MillironX)
- Release v0.1.4 (#27) (@MillironX)
v0.1.3
SequenceVariation v0.1.3
Merged pull requests:
- Add type parameterization to variations getter (#23) (@MillironX)
- Release v0.1.3 (#24) (@MillironX)
v0.1.2
SequenceVariation v0.1.2
Merged pull requests:
- Update dependencies (#21) (@MillironX)
- Release v0.1.2 (#22) (@MillironX)
v0.1.1
SequenceVariation v0.1.1
Merged pull requests:
- Add constructor for Variant based on Variations (#18) (@MillironX)
- Release v0.1.1 (#19) (@MillironX)
v0.1.0
SequenceVariation v0.1.0
Closed issues:
- [Bug]: Cannot
show
Variation
ofInsertion
(#1) - [Bug]:
Variation
s from different starting places give incorrect positions (#2) - Feature request: Add method to extract
Variation
s fromVariant
s (#5) - Feature request: Add equality functions for
Variation
(#6) - Feature request: Add a function to create
Variations
from edit strings (#7) - Feature request: Include in GeneticVariation or register as standalone package (#8)
- Feature: Create functions to get reference and alternate bases from
Variation
(#13)
Merged pull requests:
- Fix show function for Variations with Insertion edits (#3) (@MillironX)
- Fix inconsistent Variation positions (#4) (@MillironX)
- Feature/variations-parse (#9) (@MillironX)
- Add equality functions for Variation (#10) (@MillironX)
- Add functions to get
Variation
s fromVariant
(#11) (@MillironX) - Prepare for package registration (#12) (@MillironX)
- Add reference and alternate base getters for Variation (#16) (@MillironX)