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3.1.4 - bugfix and extend bulged seed handling + `IntaRNA_CSV_p-value.R`

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@martin-raden martin-raden released this 31 Jan 09:39
· 127 commits to master since this release
3.1.4
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IntaRNA

  • bugfix generation and tracing of seeds with bulges and no GU ends (combination of seedNoGUend and seed?MaxUP > 0)
  • bugfix seed-extension prediction for seeds with bulges (seed?MaxUP > 0)
  • outNoLP for seeds with bulges enabled (seed?MaxUP > 0)

auxiliary R scripts

  • IntaRNA_CSV_p-value.R script to estimate p-values based on energy values
  • IntaRNA_plotRegions.R = renaming of former plotRegions.R
Assets 4
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