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BedGraph support #204

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fgualdr opened this issue Feb 9, 2022 · 0 comments
Open

BedGraph support #204

fgualdr opened this issue Feb 9, 2022 · 0 comments

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@fgualdr
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fgualdr commented Feb 9, 2022

Hi,

I am trying to use generation and in particular the ScoreMatrix/ScoreMatrixList function to retrieve signal per base over windows in Granges object with targets BedGraph files.
I know, and I am extensively using scoreMatrix options to load Granges, bigwig etc... but there are situations where loading a bedgraph into a Granges first is really memory inefficient.
Would this be easy to implement?

Thanks a lot,
generation is really cool!

Francesco

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