Skip to content

v3.3.6
Compare
Choose a tag to compare
@rfm-targa rfm-targa released this 12 Jun 15:44
· 26 commits to master since this release
v3.3.6
44abbe0

  • Added support for translation tables different than 11 to UniprotFinder and AlleleCallEvaluator.

  • Added check for legacy schemas that include files terminating in bsr.txt. The AlleleCall module warns users that the schema needs to be adapted and exits.

  • Changed the max_targets value in UniprotFinder to avoid BLASTp warning when aligning schema representative alleles against proteomes.

  • Fixed an issue in the AlleleCallEvaluator module when using --no-pa and --no-dm.

  • The AlleleCallEvaluator module no longer tries to compute the distance matrix, MSA, and tree if the cgMLST is composed of 0 loci.

  • Fixed an issue in RemoveGenes where it would not get the first ID in the input list.

  • Updated Dockerfile. Using pip to install chewBBACA instead of downloading source from GitHub.

Assets 2
Loading