From cae1aba085550b271aaaa72b9b1f3f9e81fe6544 Mon Sep 17 00:00:00 2001 From: yufree Date: Wed, 20 Dec 2023 09:47:24 -0500 Subject: [PATCH] update --- deepspace/Dockerfile | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/deepspace/Dockerfile b/deepspace/Dockerfile index 8191b61..73c8a3e 100755 --- a/deepspace/Dockerfile +++ b/deepspace/Dockerfile @@ -7,7 +7,7 @@ RUN apt-get update \ yufree/pmd \ nhpatterson/RegCombIMS \ michalsta/opentims/opentimsr \ - && R -e "BiocManager::install(c('Cardinal','CardinalWorkflows','RNiftyReg','ClusterR','purrr','imager','umap','Rtsne','Matrix','igraph','tidygraph','ggraph','reshape2','dbscan','MALDIquantForeign','fpc','future','patchwork','ggridges','pheatmap','distances','ropls'))" \ + && R -e "BiocManager::install(c('duckdb','RNetCDF',Cardinal','CardinalWorkflows','RNiftyReg','ClusterR','purrr','imager','umap','Rtsne','Matrix','igraph','tidygraph','ggraph','reshape2','dbscan','MALDIquantForeign','fpc','future','patchwork','ggridges','pheatmap','distances','ropls'))" \ && R -e "devtools::install_url('https://github.com/yufree/SimpleITKRInstaller/releases/download/v2.0.0/SimpleITK_2.0.0_R_x86_64-pc-linux-gnu.tar.gz',build=F)" \ && rm -rf /tmp/downloaded_packages \ && rm -rf /var/lib/apt/lists/* \