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WikiExtractor.py
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#!/usr/bin/python
# -*- coding: utf-8 -*-
#
# =============================================================================
# Version: 2.5 (May 9, 2013)
# Author: Giuseppe Attardi ([email protected]), University of Pisa
# Antonio Fuschetto ([email protected]), University of Pisa
#
# Contributors:
# Leonardo Souza ([email protected])
# Juan Manuel Caicedo ([email protected])
# Humberto Pereira ([email protected])
# Siegfried-A. Gevatter ([email protected])
# Pedro Assis ([email protected])
# Walid Shalaby ([email protected])
#
# =============================================================================
# Copyright (c) 2009. Giuseppe Attardi ([email protected]).
# =============================================================================
# This file is part of Tanl.
#
# Tanl is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License, version 3,
# as published by the Free Software Foundation.
#
# Tanl is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <http://www.gnu.org/licenses/>.
# =============================================================================
"""Wikipedia Extractor:
Extracts and cleans text from Wikipedia database dump and stores output in a
number of files of similar size in a given directory.
Each file contains several documents in Tanl document format:
<doc>
<title>..</title>
<docno>..</docno>
<url>..</url>
<length>..</length>
<text>
....
</text
</doc>
Usage:
WikiExtractor.py [options]
cat enwiki-20150304-pages-articles-multistream.xml | python WikiExtractor.py -g -o wiki20150304-docs -e -a wiki20150304_anchors.txt
Options:
-c, --compress : compress output files using bzip
-b, --bytes= n[KM] : put specified bytes per output file (default 500K)
-B, --base= URL : base URL for the Wikipedia pages
-l, --link : preserve links
-n NS, --ns NS : accepted namespaces (separated by commas)
-o, --output= dir : place output files in specified directory (default
current)
-s, --sections : preserve sections
-a, --anchors : write anchors for same article in specified file
e.g., [[Jaguar|Big Cat]] indicate that article with
title "Jaguar" is also referred to as "Big Cat".
The file will will have lines in below format
anchor_text|target_title
-e, --seealso : keep see also titles (usually they represent
semantically related topics)
-p, --category : keep category information
e.g., [Category:companies] -->
<Category>companies</Cateogory>
-h, --help : display this help and exit
"""
import sys
import time
import gc
import getopt
import urllib
import re
import bz2
import os.path
from html.entities import name2codepoint
### PARAMS ####################################################################
# This is obtained from the dump itself
prefix = None
##
# Whether to preseve links in output
#
keepLinks = False
##
# Whether to flush anchors in output
#
keepAnchors = False
anchors_file = None
anchors_dic = {}
##
# Whether to transform sections into HTML
#
keepSections = False
##
# Whether to keep See also section
#
keepSeeAlso = False
##
# Whether to convert namespaces into xml
#
keepCategoryInfo = False
##
# Recognize only these namespaces
# w: Internal links to the Wikipedia
#
acceptedNamespaces = set(['w'])
# Output XML header for each doc
outputHeader = True
##
# Drop these elements from article text
#
discardElements = set([
'gallery', 'timeline', 'noinclude', 'pre',
'table', 'tr', 'td', 'th', 'caption',
'form', 'input', 'select', 'option', 'textarea',
'ul', 'li', 'ol', 'dl', 'dt', 'dd', 'menu', 'dir',
'ref', 'references', 'img', 'imagemap', 'source'
])
#=========================================================================
#
# MediaWiki Markup Grammar
# Template = "{{" [ "msg:" | "msgnw:" ] PageName { "|" [ ParameterName "=" AnyText | AnyText ] } "}}" ;
# Extension = "<" ? extension ? ">" AnyText "</" ? extension ? ">" ;
# NoWiki = "<nowiki />" | "<nowiki>" ( InlineText | BlockText ) "</nowiki>" ;
# Parameter = "{{{" ParameterName { Parameter } [ "|" { AnyText | Parameter } ] "}}}" ;
# Comment = "<!--" InlineText "-->" | "<!--" BlockText "//-->" ;
#
# ParameterName = ? uppercase, lowercase, numbers, no spaces, some special chars ? ;
#
#===========================================================================
# Program version
version = '2.5'
##### Main function ###########################################################
def WikiDocument(out, id, title, text):
url = get_url(id, prefix)
text = clean(text)
if outputHeader:
header = '<doc id="%s" url="%s" title="%s">\n' % (id, url, title)
# Separate header from text with a newline.
header += title + '\n'
header = header.encode('utf-8')
footer = "\n</doc>"
if out != sys.stdout:
out.reserve(len(header) + len(text) + len(footer))
print(header, end="", file=out)
else:
if out != sys.stdout:
out.reserve(len(text))
for line in compact(text):
print(line, end="", file=out)
if outputHeader:
print(footer, end="", file=out)
def WikiDocumentTrec(out, id, title, text):
global anchors_file, anchors_dic
url = get_url(id, prefix)
text = clean(text)
compacted_text = compact(text)
# calculate text length
length = 0
for line in compacted_text:
length += len(line)+len(os.linesep)
if outputHeader:
header = ("<doc>\n<title>%s</title>\n<docno>%s</docno>\n"
"<url>%s</url>\n<length>%d</length>\n<text>") % (title, id, url,length)
# Separate header from text with a newline.
footer = "</text>\n</doc>"
if out != sys.stdout:
out.reserve(len(header) + len(text) + len(footer))
print(header, end="\n", file=out)
else:
if out != sys.stdout:
out.reserve(len(text))
for line in compacted_text:
print(line, end="\n", file=out)
if outputHeader:
print(footer, end="\n", file=out)
def get_url(id, prefix):
return "%s?curid=%s" % (prefix, id)
#------------------------------------------------------------------------------
selfClosingTags = [ 'br', 'hr', 'nobr', 'ref', 'references' ]
# handle 'a' separetely, depending on keepLinks
ignoredTags = [
'b', 'big', 'blockquote', 'center', 'cite', 'div', 'em',
'font', 'h1', 'h2', 'h3', 'h4', 'hiero', 'i', 'kbd', 'nowiki',
'p', 'plaintext', 's', 'small', 'span', 'strike', 'strong',
'sub', 'sup', 'tt', 'u', 'var',
]
placeholder_tags = {'math':'formula', 'code':'codice'}
##
# Normalize title
def normalizeTitle(title):
# remove leading whitespace and underscores
title = title.strip(' _')
# replace sequences of whitespace and underscore chars with a single space
title = re.compile(r'[\s_]+').sub(' ', title)
m = re.compile(r'([^:]*):(\s*)(\S(?:.*))').match(title)
if m:
prefix = m.group(1)
if m.group(2):
optionalWhitespace = ' '
else:
optionalWhitespace = ''
rest = m.group(3)
ns = prefix.capitalize()
if ns in acceptedNamespaces:
# If the prefix designates a known namespace, then it might be
# followed by optional whitespace that should be removed to get
# the canonical page name
# (e.g., "Category: Births" should become "Category:Births").
title = ns + ":" + rest.capitalize()
else:
# No namespace, just capitalize first letter.
# If the part before the colon is not a known namespace, then we must
# not remove the space after the colon (if any), e.g.,
# "3001: The_Final_Odyssey" != "3001:The_Final_Odyssey".
# However, to get the canonical page name we must contract multiple
# spaces into one, because
# "3001: The_Final_Odyssey" != "3001: The_Final_Odyssey".
title = prefix.capitalize() + ":" + optionalWhitespace + rest
else:
# no namespace, just capitalize first letter
title = title.capitalize();
return title
##
# Removes HTML or XML character references and entities from a text string.
#
# @param text The HTML (or XML) source text.
# @return The plain text, as a Unicode string, if necessary.
def unescape(text):
def fixup(m):
text = m.group(0)
code = m.group(1)
try:
if text[1] == "#": # character reference
if text[2] == "x":
return unichr(int(code[1:], 16))
else:
return unichr(int(code))
else: # named entity
return unichr(name2codepoint[code])
except:
return text # leave as is
return re.sub("&#?(\w+);", fixup, text)
# Match HTML comments
comment = re.compile(r'<!--.*?-->', re.DOTALL)
# Match elements to ignore
discard_element_patterns = []
for tag in discardElements:
pattern = re.compile(r'<\s*%s\b[^>]*>.*?<\s*/\s*%s>' % (tag, tag), re.DOTALL | re.IGNORECASE)
discard_element_patterns.append(pattern)
# Match ignored tags
ignored_tag_patterns = []
def ignoreTag(tag):
left = re.compile(r'<\s*%s\b[^>]*>' % tag, re.IGNORECASE)
right = re.compile(r'<\s*/\s*%s>' % tag, re.IGNORECASE)
ignored_tag_patterns.append((left, right))
for tag in ignoredTags:
ignoreTag(tag)
# Match selfClosing HTML tags
selfClosing_tag_patterns = []
for tag in selfClosingTags:
pattern = re.compile(r'<\s*%s\b[^/]*/\s*>' % tag, re.DOTALL | re.IGNORECASE)
selfClosing_tag_patterns.append(pattern)
# Match HTML placeholder tags
placeholder_tag_patterns = []
for tag, repl in placeholder_tags.items():
pattern = re.compile(r'<\s*%s(\s*| [^>]+?)>.*?<\s*/\s*%s\s*>' % (tag, tag), re.DOTALL | re.IGNORECASE)
placeholder_tag_patterns.append((pattern, repl))
# Match preformatted lines
preformatted = re.compile(r'^ .*?$', re.MULTILINE)
# Match external links (space separates second optional parameter)
externalLink = re.compile(r'\[\w+.*? (.*?)\]')
externalLinkNoAnchor = re.compile(r'\[\w+[&\]]*\]')
# Matches bold/italic
bold_italic = re.compile(r"'''''([^']*?)'''''")
bold = re.compile(r"'''(.*?)'''")
italic_quote = re.compile(r"''\"(.*?)\"''")
italic = re.compile(r"''([^']*)''")
quote_quote = re.compile(r'""(.*?)""')
# Matches space
spaces = re.compile(r' {2,}')
# Matches dots
dots = re.compile(r'\.{4,}')
# A matching function for nested expressions, e.g. namespaces and tables.
def dropNested(text, openDelim, closeDelim):
openRE = re.compile(openDelim)
closeRE = re.compile(closeDelim)
# partition text in separate blocks { } { }
matches = [] # pairs (s, e) for each partition
nest = 0 # nesting level
start = openRE.search(text, 0)
if not start:
return text
end = closeRE.search(text, start.end())
next = start
while end:
next = openRE.search(text, next.end())
if not next: # termination
while nest: # close all pending
nest -=1
end0 = closeRE.search(text, end.end())
if end0:
end = end0
else:
break
matches.append((start.start(), end.end()))
break
while end.end() < next.start():
# { } {
if nest:
nest -= 1
# try closing more
last = end.end()
end = closeRE.search(text, end.end())
if not end: # unbalanced
if matches:
span = (matches[0][0], last)
else:
span = (start.start(), last)
matches = [span]
break
else:
matches.append((start.start(), end.end()))
# advance start, find next close
start = next
end = closeRE.search(text, next.end())
break # { }
if next != start:
# { { }
nest += 1
# collect text outside partitions
res = ''
start = 0
for s, e in matches:
res += text[start:s]
start = e
res += text[start:]
return res
def dropSpans(matches, text):
"""Drop from text the blocks identified in matches"""
matches.sort()
res = ''
start = 0
for s, e in matches:
res += text[start:s]
start = e
res += text[start:]
return res
# Match interwiki links, | separates parameters.
# First parameter is displayed, also trailing concatenated text included
# in display, e.g. s for plural).
#
# Can be nested [[File:..|..[[..]]..|..]], [[Category:...]], etc.
# We first expand inner ones, than remove enclosing ones.
#
wikiLink = re.compile(r'\[\[([^[]*?)(?:\|([^[]*?))?\]\](\w*)')
categoryLink = re.compile(r'\[\[(Category:[^\|\]]*)(\|?.*)\]\]')
seealsoLink = re.compile(r'\[\[([^\|\]]*)(\|?.*)\]\](.*)')
parametrizedLink = re.compile(r'\[\[.*?\]\]')
# Function applied to see also links
def make_seealso_tag(match):
link = match.group(1)
return '<seealso>%s</seealso>' % (link)
# Function applied to category links
def make_category_tag(match):
link = match.group(1)
colon = link.find(':')
return '<%s>%s</%s>' % (link[:colon],link[colon+1:],link[:colon])
# Function applied to wikiLinks
def make_anchor_tag(match):
global keepLinks, anchors_dic, keepAnchors, keepCategoryInfo
link = match.group(1)
colon = link.find(':')
if colon > 0 and link[:colon] not in acceptedNamespaces:
return ''
trail = match.group(3)
anchor = match.group(2)
if not anchor:
anchor = link
elif anchor!=link and keepAnchors:
# add anchor to the anchors dictionary if not there
if anchors_dic.__contains__(link):
if(anchors_dic[link].__contains__(anchor)==True):
count = anchors_dic[link][anchor] + 1
else:
count = 1
anchors_dic[link][anchor] = count
else:
anchors_dic[link] = {anchor:1}
anchor += trail
if keepLinks:
return '<a href="%s">%s</a>' % (link, anchor)
else:
return anchor
def annotateSeeAlso(text):
new_text = ""
seealso_text = ""
inside_seealso = False
for line in text.split('\n'):
new_text = new_text + line + "\n"
if line.startswith("==See also==") or line.startswith("== See also =="):
inside_seealso = True
elif inside_seealso==True:
if not line:
continue
elif line.startswith("==") or line.startswith("</page>"):
inside_seealso = False
new_text = new_text + seealso_text + "\n"
else:
line = seealsoLink.sub(make_seealso_tag, line)
if(line.find("<seealso>")!=-1):
seealso_text = seealso_text + "\n" + line[line.find("<seealso>"):]
return new_text
def clean(text):
import html
# FIXME: templates should be expanded
# Drop transclusions (template, parser functions)
# See: http://www.mediawiki.org/wiki/Help:Templates
global keepCategoryInfo, keepSeeAlso
if keepCategoryInfo==True:
text = categoryLink.sub(make_category_tag, text)
if keepSeeAlso==True:
text = annotateSeeAlso(text)
text = dropNested(text, r'{{', r'}}')
# Drop tables
text = dropNested(text, r'{\|', r'\|}')
# Expand links
text = wikiLink.sub(make_anchor_tag, text)
# Drop all remaining ones
text = parametrizedLink.sub('', text)
# Handle external links
text = externalLink.sub(r'\1', text)
text = externalLinkNoAnchor.sub('', text)
# Handle bold/italic/quote
text = bold_italic.sub(r'\1', text)
text = bold.sub(r'\1', text)
text = italic_quote.sub(r'"\1"', text)
text = italic.sub(r'"\1"', text)
text = quote_quote.sub(r'\1', text)
text = text.replace("'''", '').replace("''", '"')
################ Process HTML ###############
# turn into HTML
text = unescape(text)
# do it again (&nbsp;)
text = unescape(text)
text = html.unescape(text)
# Collect spans
matches = []
# Drop HTML comments
for m in comment.finditer(text):
matches.append((m.start(), m.end()))
# Drop self-closing tags
for pattern in selfClosing_tag_patterns:
for m in pattern.finditer(text):
matches.append((m.start(), m.end()))
# Drop ignored tags
for left, right in ignored_tag_patterns:
for m in left.finditer(text):
matches.append((m.start(), m.end()))
for m in right.finditer(text):
matches.append((m.start(), m.end()))
# Bulk remove all spans
text = dropSpans(matches, text)
# Cannot use dropSpan on these since they may be nested
# Drop discarded elements
for pattern in discard_element_patterns:
text = pattern.sub('', text)
# Expand placeholders
for pattern, placeholder in placeholder_tag_patterns:
index = 1
for match in pattern.finditer(text):
text = text.replace(match.group(), '%s_%d' % (placeholder, index))
index += 1
text = text.replace('<<', u'«').replace('>>', u'»')
#############################################
# Drop preformatted
# This can't be done before since it may remove tags
text = preformatted.sub('', text)
# Cleanup text
text = text.replace('\t', ' ')
text = spaces.sub(' ', text)
text = dots.sub('...', text)
text = re.sub(u' (,:\.\)\]»)', r'\1', text)
text = re.sub(u'(\[\(«) ', r'\1', text)
text = re.sub(r'\n\W+?\n', '\n', text) # lines with only punctuations
text = text.replace(',,', ',').replace(',.', '.')
return text
section = re.compile(r'(==+)\s*(.*?)\s*\1')
def compact(text):
"""Deal with headers, lists, empty sections, residuals of tables"""
page = [] # list of paragraph
headers = {} # Headers for unfilled sections
emptySection = False # empty sections are discarded
inList = False # whether opened <UL>
for line in text.split('\n'):
if not line:
continue
# Handle section titles
m = section.match(line)
if m:
title = m.group(2)
lev = len(m.group(1))
if keepSections:
page.append("<h%d>%s</h%d>" % (lev, title, lev))
if title and title[-1] not in '!?':
title += '.'
headers[lev] = title
# drop previous headers
to_delete = []
for i in headers.keys():
if i > lev:
to_delete.append(i)
for i in to_delete:
del headers[i]
emptySection = True
continue
# Handle page title
if line.startswith('++'):
title = line[2:-2]
if title:
if title[-1] not in '!?':
title += '.'
page.append(title)
# handle lists
elif line[0] in '*#:;':
if keepSections:
page.append("<li>%s</li>" % line[1:])
else:
continue
# Drop residuals of lists
elif line[0] in '{|' or line[-1] in '}':
continue
# Drop irrelevant lines
elif (line[0] == '(' and line[-1] == ')') or line.strip('.-') == '':
continue
elif len(headers):
items = headers.items()
sorted(items)
for (i, v) in items:
page.append(v)
headers.clear()
page.append(line) # first line
emptySection = False
elif not emptySection:
page.append(line)
return page
def handle_unicode(entity):
numeric_code = int(entity[2:-1])
if numeric_code >= 0x10000: return ''
return unichr(numeric_code)
#------------------------------------------------------------------------------
class OutputSplitter:
def __init__(self, compress, max_file_size, path_name):
self.dir_index = 0
self.file_index = -1
self.compress = compress
self.max_file_size = max_file_size
self.path_name = path_name
self.out_file = self.open_next_file()
def reserve(self, size):
cur_file_size = self.out_file.tell()
if cur_file_size + size > self.max_file_size:
self.close()
self.out_file = self.open_next_file()
def write(self, text):
self.out_file.write(text)
def close(self):
self.out_file.close()
def open_next_file(self):
self.file_index += 1
if self.file_index == 100:
self.dir_index += 1
self.file_index = 0
dir_name = self.dir_name()
if not os.path.isdir(dir_name):
os.makedirs(dir_name)
file_name = os.path.join(dir_name, self.file_name())
if self.compress:
return bz2.BZ2File(file_name + '.bz2', 'w')
else:
return open(file_name, 'w', encoding='utf-8')
def dir_name(self):
char1 = self.dir_index % 26
char2 = self.dir_index / 26 % 26
return os.path.join(self.path_name, '%c%c' % (ord('A') + char2, ord('A') + char1))
def file_name(self):
return 'wiki_%02d' % self.file_index
### READER ###################################################################
tagRE = re.compile(r'(.*?)<(/?\w+)[^>]*>(?:([^<]*)(<.*?>)?)?')
def process_data(input, output):
import html
global prefix
docs = 0
start = time.time()
page = []
id = None
inText = False
redirect = False
for line in input:
tag = ''
if '<' in line:
m = tagRE.search(line)
if m:
tag = m.group(2)
line = html.unescape(line)
if tag == 'page':
page = []
redirect = False
elif tag == 'id' and not id:
id = m.group(3)
elif tag == 'title':
title = m.group(3)
elif tag == 'redirect':
redirect = True
print(m.group(0))
elif tag == 'text':
inText = True
line = line[m.start(3):m.end(3)] + '\n'
page.append(line)
if m.lastindex == 4: # open-close
inText = False
elif tag == '/text':
if m.group(1):
page.append(m.group(1) + '\n')
inText = False
elif inText:
page.append(line)
elif tag == '/page':
colon = title.find(':')
if (colon < 0 or title[:colon] in acceptedNamespaces) and \
not redirect:
print(id, title.encode('utf-8'))
sys.stdout.flush()
WikiDocumentTrec(output, id, title, ''.join(page))
docs+=1
if not (docs%100000):
sys.stderr.write('%d docs in %.2fs, %.2f docs/second\n'%(docs, time.time()-start,docs/(time.time()-start)))
id = None
page = []
elif tag == 'base':
# discover prefix from the xml dump file
# /mediawiki/siteinfo/base
base = m.group(3)
prefix = base[:base.rfind("/")]
### CL INTERFACE ############################################################
def show_help():
print >> sys.stdout, __doc__,
def show_usage(script_name):
print >> sys.stderr, 'Usage: %s [options]' % script_name
##
# Minimum size of output files
minFileSize = 200 * 1024
def main():
import io
global keepLinks, keepSections, prefix, acceptedNamespaces, outputHeader
global keepAnchors, anchors_file, keepSeeAlso, keepCategoryInfo
script_name = os.path.basename(sys.argv[0])
try:
long_opts = ['help', 'compress', 'bytes=', 'basename=', 'links', 'ns=', 'sections', 'category', 'seealso', 'anchors=', 'output=', 'version', 'ignore=', 'text']
opts, args = getopt.gnu_getopt(sys.argv[1:], 'i:tcb:hln:gea:o:B:sv', long_opts)
except getopt.GetoptError:
show_usage(script_name)
sys.exit(1)
compress = False
file_size = 500 * 1024
output_dir = '.'
anchors_path = ''
for opt, arg in opts:
if opt in ('-h', '--help'):
show_help()
sys.exit()
elif opt in ('-i', '--ignore'):
ignoreTag(arg)
elif opt in ('-t', '--text'):
outputHeader = False
elif opt in ('-c', '--compress'):
compress = True
elif opt in ('-l', '--links'):
keepLinks = True
elif opt in ('-s', '--sections'):
keepSections = True
elif opt in ('-B', '--base'):
prefix = arg
elif opt in ('-b', '--bytes'):
try:
if arg[-1] in 'kK':
file_size = int(arg[:-1]) * 1024
elif arg[-1] in 'mM':
file_size = int(arg[:-1]) * 1024 * 1024
else:
file_size = int(arg)
if file_size < minFileSize: raise ValueError()
except ValueError:
print >> sys.stderr, \
'%s: %s: Insufficient or invalid size' % (script_name, arg)
sys.exit(2)
elif opt in ('-n', '--ns'):
acceptedNamespaces = set(arg.split(','))
elif opt in ('-o', '--output'):
output_dir = arg
elif opt in ('-a', '--anchors'):
anchors_path = arg
keepAnchors = True
elif opt in ('-e', '--seealso'):
keepSeeAlso = True
elif opt in ('-g', '--category'):
keepCategoryInfo = True
elif opt in ('-v', '--version'):
print('WikiExtractor.py version:', version)
sys.exit(0)
if len(args) > 0:
show_usage(script_name)
sys.exit(4)
if output_dir!="-":
if not os.path.isdir(output_dir):
try:
os.makedirs(output_dir)
except:
print >> sys.stderr, 'Could not create: ', output_dir
return
output_splitter = OutputSplitter(compress, file_size, output_dir)
else:
output_splitter = sys.stdout
if compress:
raise Exception('Incompatible options, you cannot compress stdout, use a pipe instead')
if keepAnchors:
try:
anchors_file = open(anchors_path,'w',encoding='utf-8')
except:
print >> sys.stderr, 'Could not create: ', anchors_path
return
if not keepLinks:
ignoreTag('a')
input_stream = io.TextIOWrapper(sys.stdin.buffer, encoding='utf-8')
process_data(input_stream, output_splitter)
output_splitter.close()
# write anchors
if keepAnchors:
for link in anchors_dic.keys():
for anchor,count in anchors_dic[link].items():
anchors_file.write(link+'|'+anchor+'|'+str(count)+os.linesep)
anchors_file.close
if __name__ == '__main__':
main()