Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

addition of new mutation types #21

Open
awast opened this issue Sep 20, 2022 · 0 comments
Open

addition of new mutation types #21

awast opened this issue Sep 20, 2022 · 0 comments

Comments

@awast
Copy link

awast commented Sep 20, 2022

Hi,
I would like to request that if it possible to add new mutation types for example:
_from script:

default rename is to collapse ins and del to indel

if rename is None:
    rename = {'Nonsense_Mutation': 'Nonsense', 'In_Frame_Del': 'In frame indel', 'In_Frame_Ins': 'In frame indel',
              'Frame_Shift_Del': 'Frameshift indel', 'Missense_Mutation': 'Missense', 'Splice_Site': 'Splice site', 'Frame_Shift_Ins': 'Frameshift indel'}__

like above is it possible to add some addittional mutation names like for :

  1. startloss
  2. startgain
    3.stoploss
    please suggest how can i add these names to mutation types
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant