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Benchmark suffix array index using different input sizes #5

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tibvdm opened this issue Mar 11, 2024 · 0 comments

Open

5 tasks

Tracked by

Benchmark suffix array index using different input sizes #5

tibvdm opened this issue Mar 11, 2024 · 0 comments

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tibvdm commented Mar 11, 2024 •

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Benchmark the construction of the suffix array index with databases of different input size:

Construction time
Peak memory usage
Final index size (suffix array + accession mapping)

Benchmark using a sparseness factor of 3:

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Tracking: Benchmark suffix array index #4

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tibvdm added the benchmarks label

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