diff --git a/.github/workflows/publish.yml b/.github/workflows/publish_linux.yml
similarity index 76%
rename from .github/workflows/publish.yml
rename to .github/workflows/publish_linux.yml
index f9508e53..47b36619 100644
--- a/.github/workflows/publish.yml
+++ b/.github/workflows/publish_linux.yml
@@ -6,11 +6,8 @@ on:
       - master
 
 jobs:
-  publish:
-    runs-on: ${{ matrix.os }}
-    strategy:
-      matrix:
-        os: [windows-latest, ubuntu-latest]
+  release_linux:
+    runs-on: ubuntu-latest
 
     steps:
       - uses: actions/checkout@v1
diff --git a/.github/workflows/publish_macos.yml b/.github/workflows/publish_macos.yml
index f123a85b..12774a34 100644
--- a/.github/workflows/publish_macos.yml
+++ b/.github/workflows/publish_macos.yml
@@ -6,7 +6,7 @@ on:
       - master
 
 jobs:
-  release:
+  release_macos:
     runs-on: macos-latest
 
     steps:
diff --git a/.github/workflows/publish_windows.yml b/.github/workflows/publish_windows.yml
new file mode 100644
index 00000000..15ad4705
--- /dev/null
+++ b/.github/workflows/publish_windows.yml
@@ -0,0 +1,23 @@
+name: Publish app on Windows
+
+on:
+  push:
+    branches:
+      - master
+
+jobs:
+  release_windows:
+    runs-on: windows-latest
+
+    steps:
+      - uses: actions/checkout@v1
+      - uses: actions/setup-node@v1
+      - name: Build/release Electron app
+        uses: samuelmeuli/action-electron-builder@v1
+        with:
+          github_token: ${{ secrets.GH_TOKEN }}
+          use_vue_cli: true
+          windows_certs: ${{ secrets.windows_certs }}
+          windows_certs_password: ${{ secrets.windows_certs_password }}
+          release: true
+
diff --git a/package.json b/package.json
index f4b5cc41..774a8f5e 100644
--- a/package.json
+++ b/package.json
@@ -1,6 +1,6 @@
 {
   "name": "unipept-desktop",
-  "version": "0.6.0",
+  "version": "0.6.1",
   "private": true,
   "author": "Unipept Team (Ghent University)",
   "description": "A desktop equivalent of unipept.ugent.be. This app aims at high-throughput analysis of metaproteomics samples.",