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Notes

  • As in previous uploads while in a non-interactive session (i.e. in an Rscript) if parse_args() observes a help flag it will print a usage message and then call quit(). Additionally if a user specifically adds a 'version' argument to the command-line parser with action='version' then if parse_args() observes a version flag while in a non-interactive session then it will print the version number and then call quit().

  • This package has a Python dependency most easily satisfied having (C)Python 3.2 or greater on the PATH. See file INSTALL for more details.

Test environments

  • local (linux), R 4.4.2
  • win-builder (windows), R devel
  • Github Actions (linux), R devel, release, oldrel
  • Github Actions (windows), R release
  • Github Actions (OSX), R release

R CMD check --as-cran results

Status: OK

revdepcheck results

We checked 4 reverse dependencies (0 from CRAN + 4 from Bioconductor), comparing R CMD check results across CRAN and dev versions of this package.

  • We saw 0 new problems
  • We failed to check 0 packages