From f8cd55b8ecff395885b3482a06e58b5e202d6d6f Mon Sep 17 00:00:00 2001 From: mikelove Date: Fri, 24 Nov 2023 16:40:09 -0500 Subject: [PATCH] addresses bug introduced in 1.20, fixes #80 --- R/tximeta.R | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/R/tximeta.R b/R/tximeta.R index 317d4f0..af4bc85 100644 --- a/R/tximeta.R +++ b/R/tximeta.R @@ -257,8 +257,8 @@ tximeta <- function(coldata, if (type == "alevin") { metaInfo <- list(getMetaInfo(dirname(files), - type=type, - customMetaInfo=customMetaInfo)) + type = "salmon", + customMetaInfo = customMetaInfo)) } else { # get quantifier metadata from JSON files within quant dirs metaInfo <- lapply(files, getMetaInfo,