diff --git a/R/tximeta.R b/R/tximeta.R index 317d4f0..af4bc85 100644 --- a/R/tximeta.R +++ b/R/tximeta.R @@ -257,8 +257,8 @@ tximeta <- function(coldata, if (type == "alevin") { metaInfo <- list(getMetaInfo(dirname(files), - type=type, - customMetaInfo=customMetaInfo)) + type = "salmon", + customMetaInfo = customMetaInfo)) } else { # get quantifier metadata from JSON files within quant dirs metaInfo <- lapply(files, getMetaInfo,