Attach manuscript accession from Pubmed that we need to read.

[ypriverol]

@percolator would be great to put in this issue a set of papers that contains algorithms we need to read for Consensus Spectrum creation. We can put some pseudo-code about the existing algorithms.

[ypriverol]

I have started to add a couple of Tools that generate spectra libraries and the corresponding approach they use:

• Skyline BiblioSpec - Best Spectrum in Cluster (https://skyline.ms/announcements/home/support/thread.view?rowId=30508).

• spectra-cluster (PRIDE) - Consensus spectrum.

• SpectraST - Consensus cluster. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2637392/

• NIST - Consensus spectra - https://math.nist.gov/mcsd/Seminars/2016/2016-05-02-Sheetlin.html

[percolator]

I added this as markdowns to the repositories github page. Check it out at: https://statisticalbiotechnology.github.io/specpride/

…

On Mon, Dec 9, 2019 at 5:06 PM Yasset Perez-Riverol < ***@***.***> wrote: I have started to add a couple of Tools that generate spectra libraries and the corresponding approach they use: - Skyline BiblioSpec - Best Spectrum in Cluster ( https://skyline.ms/announcements/home/support/thread.view?rowId=30508). - spectra-cluster (PRIDE) - Consensus spectrum. — You are receiving this because you were assigned. Reply to this email directly, view it on GitHub <#1>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AAAXKAGYCM2UZRZV2ZRYK3TQXZUH3ANCNFSM4JYHHMGA> .

[ypriverol]

Nice.

[timosachsenberg]

Loosely related
Denoising Peptide Tandem Mass Spectra for Spectral Libraries: A Bayesian Approach https://pubs.acs.org/doi/10.1021/pr400080b