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Commandline ProteoformSuite #362

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acesnik opened this issue Apr 19, 2017 · 1 comment

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0.4.0 End-to-end ...

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acesnik commented Apr 19, 2017

Basic commandline functionality
Code to handle massively parallel applications (MPI)

acesnik added the New Feature label

acesnik added this to the 0.4.0 Future Task milestone

Collaborator Author

acesnik commented Nov 14, 2017 •

edited by leahvschaffer

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Let's do this soon, since we now have integrated deconvolution.

Add integrated NeuCode deconvolution and evaluate with the YSNS experiment.
Add a commandline program that runs through the whole program and outputs the results using ResultsSummaryGenerator
Move the code over to .NETCore, so that it can be run on a Galaxy instance
Communicate with JJ over at UMN, so that he can make a Galaxy wrapper for this.
Write a paper about how intact proteoform analysis is possible in Galaxy-P.

acesnik modified the milestones: 0.4.0 End-to-end processing, 1.0.0 Future tasks

leahvschaffer mentioned this issue

EE notches #541

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