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Deprecate VCF write functions #1245

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tomwhite opened this issue Aug 19, 2024 · 2 comments
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Deprecate VCF write functions #1245

tomwhite opened this issue Aug 19, 2024 · 2 comments
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documentation Improvements or additions to documentation IO Issues related to reading and writing common third-party file formats

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@tomwhite
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Once vcztools has been released we should deprecate sgkit's write_vcf and zarr_to_vcf functions for writing VCF.
@tomwhite tomwhite added documentation Improvements or additions to documentation IO Issues related to reading and writing common third-party file formats labels Aug 19, 2024
@tomwhite
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We could also add a link to vcftools view to the documentation for display_genotypes as a suggested alternative.

@tomwhite tomwhite mentioned this issue Sep 24, 2024
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Superceded by #1264

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