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requirements.txt
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requirements.txt
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alembic==1.4.2
anndata==0.7.3
ase==3.19.1
attrs==19.3.0
backcall==0.2.0
bleach==3.1.5
bokeh==2.1.1
certifi==2020.6.20
cffi==1.14.0
chardet==3.0.4
cliff==3.3.0
cmaes==0.5.1
cmake==3.17.3
cmd2==1.2.1
colorama==0.4.3
colorlog==4.1.0
cycler==0.10.0
decorator==4.4.2
defusedxml==0.6.0
entrypoints==0.3
future==0.18.2
get-version==2.1
googledrivedownloader==0.4
h5py==2.10.0
idna==2.9
imageio==2.8.0
importlib-metadata==1.7.0
ipykernel==5.3.0
ipython==7.15.0
ipython-genutils==0.2.0
ipywidgets==7.5.1
isodate==0.6.0
jedi==0.17.0
Jinja2==2.11.2
joblib==0.15.1
jsonschema==3.2.0
jupyter==1.0.0
jupyter-client==6.1.3
jupyter-console==6.1.0
jupyter-core==4.6.3
kiwisolver==1.2.0
legacy-api-wrap==1.2
livelossplot==0.5.1
llvmlite==0.33.0
louvain==0.7.0
Mako==1.1.3
MarkupSafe==1.1.1
matplotlib==3.2.2
mistune==0.8.4
MulticoreTSNE==0.1
natsort==7.0.1
nbconvert==5.6.1
nbformat==5.0.7
networkx==2.4
notebook==6.0.3
numba==0.50.1
numexpr==2.7.1
numpy==1.19.0
optuna==1.5.0
packaging==20.4
pandas==1.0.5
pandocfilters==1.4.2
parso==0.7.0
patsy==0.5.1
pbr==5.4.5
pexpect==4.8.0
pickleshare==0.7.5
Pillow==7.1.2
plyfile==0.7.2
prettytable==0.7.2
prometheus-client==0.8.0
prompt-toolkit==3.0.5
ptyprocess==0.6.0
pycparser==2.20
Pygments==2.6.1
pyparsing==2.4.7
pyperclip==1.8.0
pyrsistent==0.16.0
python-dateutil==2.8.1
python-editor==1.0.4
python-igraph==0.8.2
pytz==2020.1
PyWavelets==1.1.1
PyYAML==5.3.1
pyzmq==19.0.1
qtconsole==4.7.4
QtPy==1.9.0
rdflib==5.0.0
requests==2.24.0
scanpy==1.5.1
scikit-image==0.17.2
scikit-learn==0.23.1
scipy==1.5.0
seaborn==0.10.1
Send2Trash==1.5.0
setuptools-scm==4.1.2
six==1.15.0
SQLAlchemy==1.3.18
statsmodels==0.11.1
stevedore==3.2.0
tables==3.6.1
tbb==2020.0.133
terminado==0.8.3
testpath==0.4.4
texttable==1.6.2
threadpoolctl==2.1.0
tifffile==2020.6.3
torch==1.4.0
torch-geometric==1.4.2
torch-scatter==2.0.4
torch-sparse==0.6.0
torchvision==0.5.0
tornado==6.0.4
tqdm==4.46.1
traitlets==4.3.3
typing-extensions==3.7.4.2
umap-learn==0.4.4
urllib3==1.25.9
wcwidth==0.2.4
webencodings==0.5.1
widgetsnbextension==3.5.1
zipp==3.1.0