From 6d0a402788854e2886d10ac57c48e5ce8b32d507 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Nahuel=20Unai=20Rosell=C3=B3=20Beneitez?=
 <31628502+Icemole@users.noreply.github.com>
Date: Thu, 18 Jul 2024 10:35:41 +0200
Subject: [PATCH] Remove clip from alignment plot

The clip isn't beneficial when one wants to see the plot as a whole.
---
 mm/alignment.py | 1 -
 1 file changed, 1 deletion(-)

diff --git a/mm/alignment.py b/mm/alignment.py
index 91bd71b2..377d0d22 100644
--- a/mm/alignment.py
+++ b/mm/alignment.py
@@ -166,7 +166,6 @@ def plot(self):
 
         # Plot the data.
         matplotlib.use("Agg")
-        np.clip(np_alignment_scores, np_alignment_scores.min(), higher_percentile, out=np_alignment_scores)
         plt.hist(np_alignment_scores, bins=100)
         plt.xlabel("Average Maximum-Likelihood Score")
         plt.ylabel("Number of Segments")