The big list of checkUsage output.

[SimonGoring]

I'm willing to let most of these slide (probably) but thought this shold be here for posterity in case any of these pop up as problems later.

Bind

• bind : : parameter ‘x’ changed by assignment (.../GitHub/neotoma_ropensci/R/bind.R:62-65)
• bind : : parameter ‘x’ changed by assignment (.../GitHub/neotoma_ropensci/R/bind.R:77-80)
• bind: parameter ‘x’ changed by assignment (.../GitHub/neotoma_ropensci/R/bind.R:76-81)

Compile_downloads

• compile_downloads : down.to.df: parameter ‘x’ changed by assignment .../GitHub/neotoma_ropensci/R/compile_downloads.R:58-91)
• compile_list: parameter ‘list.name’ changed by assignment (.../GitHub/neotoma_ropensci/R/compile_list.R:61)
• compile_taxa: parameter ‘list.name’ changed by assignment (.../GitHub/neotoma_ropensci/R/compile_taxa.R:61-63)

Get Dataset

• get_dataset.default : : parameter ‘x’ changed by assignment (.../GitHub/neotoma_ropensci/R/get_dataset.R:126-137)
• get_datasets : : parameter ‘x’ changed by assignment (.../GitHub/neotoma_ropensci/R/get_datasets.R:167)
• get_datasets : : parameter ‘x’ changed by assignment (.../GitHub/neotoma_ropensci/R/get_datasets.R:171)
• get_datasets : : parameter ‘x’ changed by assignment (.../GitHub/neotoma_ropensci/R/get_datasets.R:180)
• get_datasets: parameter ‘altmax’ changed by assignment (.../GitHub/neotoma_ropensci/R/get_datasets.R:89)
• get_datasets: parameter ‘altmin’ changed by assignment (.../GitHub/neotoma_ropensci/R/get_datasets.R:88)
• get_datasets: parameter ‘gpid’ changed by assignment (.../GitHub/neotoma_ropensci/R/get_datasets.R:69-80)

Get Download

• get_download.default : get.sample: local variable ‘message’ used as function with no apparent local function definition (.../GitHub/neotoma_ropensci/R/get_download.R:106-108)

Get Geochron

• get_geochron.dataset_list: parameter ‘x’ changed by assignment (.../GitHub/neotoma_ropensci/R/get_geochron.R:171)

Get Site

• get_sites: parameter ‘altmax’ changed by assignment (.../GitHub/neotoma_ropensci/R/get_sites.R:33)
• get_sites: parameter ‘altmin’ changed by assignment (.../GitHub/neotoma_ropensci/R/get_sites.R:32)
• get_sites: parameter ‘gpid’ changed by assignment (.../GitHub/neotoma_ropensci/R/get_sites.R:63-74)

Get Table

• get_table: parameter ‘table.name’ changed by assignment (.../GitHub/neotoma_ropensci/R/get_table.R:56-105)

Get Taxa

• get_taxa : : parameter ‘x’ changed by assignment (.../GitHub/neotoma_ropensci/R/get_taxa.R:103)

Param Check

• param_check: parameter ‘cl’ changed by assignment (.../GitHub/neotoma_ropensci/R/param_check.R:24-39)

Print

• print.download_list: parameter ‘x’ changed by assignment (.../GitHub/neotoma_ropensci/R/print.download_list.R:4-13)
• print.site: parameter ‘x’ changed by assignment (.../GitHub/neotoma_ropensci/R/print.site.R:4)

Write Agefile

• write_agefile: parameter ‘download’ changed by assignment (.../GitHub/neotoma_ropensci/R/write_agefile.R:34-37)

[SimonGoring]

I'm removing all the "may not be used" issues here.