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updated check for alignment truncation. lastz can return an exit_code of 0 but still have output on stderr Galaxy Tool Linting and Tests for push and PR #90: Pull request #19 opened by richard-burhans
August 13, 2024 23:19 8m 38s update-batched-lastz
update-batched-lastz
August 13, 2024 23:19 8m 38s
Merge pull request #18 from richard-burhans/update-batched-lastz Galaxy Tool Linting and Tests for push and PR #89: Commit effd27b pushed by richard-burhans
August 13, 2024 15:47 8m 57s main
main
August 13, 2024 15:47 8m 57s
updating check for truncated alignment Galaxy Tool Linting and Tests for push and PR #88: Pull request #18 synchronize by richard-burhans
August 13, 2024 15:33 13m 6s update-batched-lastz
update-batched-lastz
August 13, 2024 15:33 13m 6s
updating check for truncated alignment Galaxy Tool Linting and Tests for push and PR #87: Pull request #18 opened by richard-burhans
August 13, 2024 15:28 5m 54s update-batched-lastz
update-batched-lastz
August 13, 2024 15:28 5m 54s
Merge pull request #17 from martenson/patch-1 Galaxy Tool Linting and Tests for push and PR #86: Commit 52a5597 pushed by richard-burhans
August 12, 2024 15:31 10m 2s main
main
August 12, 2024 15:31 10m 2s
bump lastz/segalign version suffixes Galaxy Tool Linting and Tests for push and PR #85: Pull request #17 synchronize by martenson
August 12, 2024 15:09 8m 6s martenson:patch-1
martenson:patch-1
August 12, 2024 15:09 8m 6s
Merge pull request #16 from richard-burhans/update-batched-lastz-x Galaxy Tool Linting and Tests for push and PR #83: Commit a5a11ff pushed by richard-burhans
August 9, 2024 21:05 5m 24s main
main
August 9, 2024 21:05 5m 24s
adding default --allocate:traceback=1.99G. warnings based on this are no longer considered errors Galaxy Tool Linting and Tests for push and PR #82: Pull request #16 opened by richard-burhans
August 9, 2024 21:00 4m 16s update-batched-lastz-x
update-batched-lastz-x
August 9, 2024 21:00 4m 16s
Merge pull request #15 from richard-burhans/update-segalign_x Galaxy Tool Linting and Tests for push and PR #81: Commit e4e05d2 pushed by richard-burhans
August 9, 2024 20:13 10m 13s main
main
August 9, 2024 20:13 10m 13s
Change default --seq_block_size=400000000, update to latest diagonal_partition.py Galaxy Tool Linting and Tests for push and PR #80: Pull request #15 opened by richard-burhans
August 9, 2024 20:03 9m 49s update-segalign_x
update-segalign_x
August 9, 2024 20:03 9m 49s
Merge pull request #14 from richard-burhans/update-segalign-runner Galaxy Tool Linting and Tests for push and PR #79: Commit 4b56e02 pushed by richard-burhans
August 7, 2024 20:24 10m 38s main
main
August 7, 2024 20:24 10m 38s
added bufsize=1 to subprocess call when running segalign to make it line buffered Galaxy Tool Linting and Tests for push and PR #78: Pull request #14 opened by richard-burhans
August 7, 2024 20:09 12m 31s update-segalign-runner
update-segalign-runner
August 7, 2024 20:09 12m 31s
Merge pull request #13 from richard-burhans/update-segalign Galaxy Tool Linting and Tests for push and PR #77: Commit 2840545 pushed by richard-burhans
August 1, 2024 18:30 9m 38s main
main
August 1, 2024 18:30 9m 38s
Fixed regex, added debug timing for package_output.py Galaxy Tool Linting and Tests for push and PR #76: Pull request #13 synchronize by richard-burhans
August 1, 2024 18:22 7m 40s update-segalign
update-segalign
August 1, 2024 18:22 7m 40s
Fixed regex, added debug timing for package_output.py Galaxy Tool Linting and Tests for push and PR #75: Pull request #13 opened by richard-burhans
August 1, 2024 18:11 9m 18s update-segalign
update-segalign
August 1, 2024 18:11 9m 18s
Merge pull request #12 from richard-burhans/update-segalign Galaxy Tool Linting and Tests for push and PR #74: Commit 6930a27 pushed by richard-burhans
July 31, 2024 02:34 6m 11s main
main
July 31, 2024 02:34 6m 11s
fixing regex from rebase error Galaxy Tool Linting and Tests for push and PR #73: Pull request #12 opened by richard-burhans
July 31, 2024 02:24 10m 38s update-segalign
update-segalign
July 31, 2024 02:24 10m 38s
Merge pull request #11 from richard-burhans/update-batched-lastz Galaxy Tool Linting and Tests for push and PR #72: Commit 869a01a pushed by richard-burhans
July 30, 2024 19:48 5m 49s main
main
July 30, 2024 19:48 5m 49s
Updating to set correct format for output Galaxy Tool Linting and Tests for push and PR #71: Pull request #11 opened by richard-burhans
July 30, 2024 19:43 4m 37s update-batched-lastz
update-batched-lastz
July 30, 2024 19:43 4m 37s
Merge pull request #10 from richard-burhans/update-segalign Galaxy Tool Linting and Tests for push and PR #70: Commit b5d08d8 pushed by richard-burhans
July 30, 2024 17:20 4m 50s main
main
July 30, 2024 17:20 4m 50s
removing script we no longer need Galaxy Tool Linting and Tests for push and PR #69: Pull request #10 opened by richard-burhans
July 30, 2024 17:20 4m 53s update-segalign
update-segalign
July 30, 2024 17:20 4m 53s
Simplifying available options Galaxy Tool Linting and Tests for push and PR #68: Pull request #9 synchronize by richard-burhans
July 30, 2024 17:12 7m 47s update-segalign
update-segalign
July 30, 2024 17:12 7m 47s
Merge pull request #9 from richard-burhans/update-segalign Galaxy Tool Linting and Tests for push and PR #67: Commit 6cf972d pushed by richard-burhans
July 30, 2024 17:11 8m 28s main
main
July 30, 2024 17:11 8m 28s
Accidentaly removed --tool_directory option Galaxy Tool Linting and Tests for push and PR #66: Commit a7aa8a6 pushed by richard-burhans
July 30, 2024 03:25 6m 5s main
main
July 30, 2024 03:25 6m 5s
Merge pull request #8 from richard-burhans/update-segalign Galaxy Tool Linting and Tests for push and PR #65: Commit eb6ee04 pushed by richard-burhans
July 29, 2024 20:44 9m 13s main
main
July 29, 2024 20:44 9m 13s