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freiburg |
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Miracum whole-exome sequencing pipeline workshop in Freiburg |
2019-03-13 |
2019-03-14 |
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Workshop for future users/maintainers of the Miracum WES anaylsis workflow with the goals of presenting the current version of the Galaxy workflow, demonstrating its usage, and of gathering feedback from participants.
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- To be able to perform the hands-on analysis part of the workshop, please register for a user account on the European Galaxy server before the workshop.
- Desktop computers are available for everyone, but you can also bring your own notebook if you prefer. Eduroam is available, ask your institute for how to login.
- The workshop is free of charge. Unfortunately no stipends for travel or accommodation are available.
| Day | Topics |
|---|---|
| Wed | 14:00 - 18:00 |
| -> | Introduction to Galaxy and its user interface |
| -> | Outline of the Miracum WES analysis workflow |
| -> | Hands-on analysis of representative patient data |
| Thu | 9:00 - 12:30 |
| -> | Generation of custom variant queries and reports |
| -> | Discussion, feedback |
| {:.table.table-striped} |
No prior knowledge of the Galaxy platform is required for this workshop (although it may be helpful if you have taken a look at a public Galaxy server before), but you will need an active user account on the European Galaxy server.
If you have any questions, please do not hesitate to contact us.
From Basel airport to Freiburg you have two options:
- Take the train to Freiburg Hauptbahnhof (ICE or EC takes 30 min; Regio 60 min)
- Take the airport shuttle bus to Freiburg Hauptbahnhof (Timetable)
From Freiburg Hauptbahnhof to Venue you should use local public transport (VAG):
- Tram line map
- Tram line: 2
- Tram stop: "Hauptstraße"
You are looking for building 1 (Institute of Biology II/III) on the university map
Some suggestions for hotels (please check portals such as HRS, booking, etc.)
| Hotel | Location | Website |
|---|---|---|
| Hotel am Rathaus | Rathausgasse 4-8 | Website |
| Hotel Barbara | Poststrasse 4 | Website |
| Intercity Hotel Freiburg | Bismarckallee 3 | Website |
| Stadthotel Freiburg Kolping Hotel & Gästehaus | Karlstr.7 | Website |
| Ibis Freiburg Süd (bit more far away) | Bötzinger Str.76 | Website |
| StayInn Hostel und Gästehaus | Stühlinger Str.24a | Website |
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Note: In Freiburg you sometimes have to pay an additional accommodation tax. For business trips this tax does not to be paid if your employer fills out this form. You will need to show this form to the hotel. {:.alert.alert-warning}
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