From 26a2012020024628d4b9bd4df5b82eb91563df45 Mon Sep 17 00:00:00 2001
From: mkalal6 <137332780+mkalal6@users.noreply.github.com>
Date: Sun, 27 Oct 2024 09:11:12 -0500
Subject: [PATCH 1/7] still fixing file_path issue

---
 client-app/src/components/DraftOrcaDashboard.js | 8 ++++----
 1 file changed, 4 insertions(+), 4 deletions(-)

diff --git a/client-app/src/components/DraftOrcaDashboard.js b/client-app/src/components/DraftOrcaDashboard.js
index d1b83c79..e8dee550 100644
--- a/client-app/src/components/DraftOrcaDashboard.js
+++ b/client-app/src/components/DraftOrcaDashboard.js
@@ -24,7 +24,7 @@ const DraftOrcaDashboard = () => {
       return;
     }
     setSelectedFile(selectedFile);
-    setFileName(selectedFile.name.split("/").pop());
+    setFileName(selectedFile.path);
   };
 
   const isSearchQueryEnabled = () => {
@@ -76,8 +76,8 @@ const DraftOrcaDashboard = () => {
     axios
       .post("http://localhost:5001/upload", formData)
       .then((response) => {
-        const uploadedFileName = response.data.filename.split("/").pop();
-        setFileName(uploadedFileName);
+        //const uploadedFileName = response.data.filename.split("/").pop();
+        setFileName(response.data.file_path);
         setUploadedFiles((prevUploadedFiles) => [...prevUploadedFiles, uploadedFileName]);
       })
       .catch((error) => {
@@ -97,7 +97,7 @@ const DraftOrcaDashboard = () => {
     }
 
     const data = {
-      file_path: fileName.toString(),
+      file_path: fileName,
       search_terms: searchTerms,
       sections: sections,
       specify_lines: specifyLines.join(","),

From ec6d876b9db4fdd74509696b64d45610691096d2 Mon Sep 17 00:00:00 2001
From: mkalal6 <137332780+mkalal6@users.noreply.github.com>
Date: Mon, 28 Oct 2024 17:29:32 -0500
Subject: [PATCH 2/7] issue#62 completed

---
 .../src/components/DraftOrcaDashboard.js      |   8 +-
 server/ven/bin/Activate.ps1                   | 247 ++++++++++++++++++
 server/ven/bin/activate                       |  69 +++++
 server/ven/bin/activate.csh                   |  26 ++
 server/ven/bin/activate.fish                  |  69 +++++
 server/ven/bin/coverage                       |   8 +
 server/ven/bin/coverage-3.11                  |   8 +
 server/ven/bin/coverage3                      |   8 +
 server/ven/bin/flask                          |   8 +
 server/ven/bin/pip                            |   8 +
 server/ven/bin/pip3                           |   8 +
 server/ven/bin/pip3.11                        |   8 +
 server/ven/bin/py.test                        |   8 +
 server/ven/bin/pytest                         |   8 +
 server/ven/bin/python                         |   1 +
 server/ven/bin/python3                        |   1 +
 server/ven/bin/python3.11                     |   1 +
 server/ven/pyvenv.cfg                         |   5 +
 18 files changed, 495 insertions(+), 4 deletions(-)
 create mode 100644 server/ven/bin/Activate.ps1
 create mode 100644 server/ven/bin/activate
 create mode 100644 server/ven/bin/activate.csh
 create mode 100644 server/ven/bin/activate.fish
 create mode 100755 server/ven/bin/coverage
 create mode 100755 server/ven/bin/coverage-3.11
 create mode 100755 server/ven/bin/coverage3
 create mode 100755 server/ven/bin/flask
 create mode 100755 server/ven/bin/pip
 create mode 100755 server/ven/bin/pip3
 create mode 100755 server/ven/bin/pip3.11
 create mode 100755 server/ven/bin/py.test
 create mode 100755 server/ven/bin/pytest
 create mode 120000 server/ven/bin/python
 create mode 120000 server/ven/bin/python3
 create mode 120000 server/ven/bin/python3.11
 create mode 100644 server/ven/pyvenv.cfg

diff --git a/client-app/src/components/DraftOrcaDashboard.js b/client-app/src/components/DraftOrcaDashboard.js
index e8dee550..39d4742e 100644
--- a/client-app/src/components/DraftOrcaDashboard.js
+++ b/client-app/src/components/DraftOrcaDashboard.js
@@ -24,7 +24,7 @@ const DraftOrcaDashboard = () => {
       return;
     }
     setSelectedFile(selectedFile);
-    setFileName(selectedFile.path);
+    setFileName(selectedFile.name.split("/").pop());
   };
 
   const isSearchQueryEnabled = () => {
@@ -76,8 +76,8 @@ const DraftOrcaDashboard = () => {
     axios
       .post("http://localhost:5001/upload", formData)
       .then((response) => {
-        //const uploadedFileName = response.data.filename.split("/").pop();
-        setFileName(response.data.file_path);
+        const uploadedFileName = response.data.filename.split("/").pop();
+        setFileName(response.data.filename);
         setUploadedFiles((prevUploadedFiles) => [...prevUploadedFiles, uploadedFileName]);
       })
       .catch((error) => {
@@ -97,7 +97,7 @@ const DraftOrcaDashboard = () => {
     }
 
     const data = {
-      file_path: fileName,
+      file_path: fileName.toString(),
       search_terms: searchTerms,
       sections: sections,
       specify_lines: specifyLines.join(","),
diff --git a/server/ven/bin/Activate.ps1 b/server/ven/bin/Activate.ps1
new file mode 100644
index 00000000..b49d77ba
--- /dev/null
+++ b/server/ven/bin/Activate.ps1
@@ -0,0 +1,247 @@
+<#
+.Synopsis
+Activate a Python virtual environment for the current PowerShell session.
+
+.Description
+Pushes the python executable for a virtual environment to the front of the
+$Env:PATH environment variable and sets the prompt to signify that you are
+in a Python virtual environment. Makes use of the command line switches as
+well as the `pyvenv.cfg` file values present in the virtual environment.
+
+.Parameter VenvDir
+Path to the directory that contains the virtual environment to activate. The
+default value for this is the parent of the directory that the Activate.ps1
+script is located within.
+
+.Parameter Prompt
+The prompt prefix to display when this virtual environment is activated. By
+default, this prompt is the name of the virtual environment folder (VenvDir)
+surrounded by parentheses and followed by a single space (ie. '(.venv) ').
+
+.Example
+Activate.ps1
+Activates the Python virtual environment that contains the Activate.ps1 script.
+
+.Example
+Activate.ps1 -Verbose
+Activates the Python virtual environment that contains the Activate.ps1 script,
+and shows extra information about the activation as it executes.
+
+.Example
+Activate.ps1 -VenvDir C:\Users\MyUser\Common\.venv
+Activates the Python virtual environment located in the specified location.
+
+.Example
+Activate.ps1 -Prompt "MyPython"
+Activates the Python virtual environment that contains the Activate.ps1 script,
+and prefixes the current prompt with the specified string (surrounded in
+parentheses) while the virtual environment is active.
+
+.Notes
+On Windows, it may be required to enable this Activate.ps1 script by setting the
+execution policy for the user. You can do this by issuing the following PowerShell
+command:
+
+PS C:\> Set-ExecutionPolicy -ExecutionPolicy RemoteSigned -Scope CurrentUser
+
+For more information on Execution Policies: 
+https://go.microsoft.com/fwlink/?LinkID=135170
+
+#>
+Param(
+    [Parameter(Mandatory = $false)]
+    [String]
+    $VenvDir,
+    [Parameter(Mandatory = $false)]
+    [String]
+    $Prompt
+)
+
+<# Function declarations --------------------------------------------------- #>
+
+<#
+.Synopsis
+Remove all shell session elements added by the Activate script, including the
+addition of the virtual environment's Python executable from the beginning of
+the PATH variable.
+
+.Parameter NonDestructive
+If present, do not remove this function from the global namespace for the
+session.
+
+#>
+function global:deactivate ([switch]$NonDestructive) {
+    # Revert to original values
+
+    # The prior prompt:
+    if (Test-Path -Path Function:_OLD_VIRTUAL_PROMPT) {
+        Copy-Item -Path Function:_OLD_VIRTUAL_PROMPT -Destination Function:prompt
+        Remove-Item -Path Function:_OLD_VIRTUAL_PROMPT
+    }
+
+    # The prior PYTHONHOME:
+    if (Test-Path -Path Env:_OLD_VIRTUAL_PYTHONHOME) {
+        Copy-Item -Path Env:_OLD_VIRTUAL_PYTHONHOME -Destination Env:PYTHONHOME
+        Remove-Item -Path Env:_OLD_VIRTUAL_PYTHONHOME
+    }
+
+    # The prior PATH:
+    if (Test-Path -Path Env:_OLD_VIRTUAL_PATH) {
+        Copy-Item -Path Env:_OLD_VIRTUAL_PATH -Destination Env:PATH
+        Remove-Item -Path Env:_OLD_VIRTUAL_PATH
+    }
+
+    # Just remove the VIRTUAL_ENV altogether:
+    if (Test-Path -Path Env:VIRTUAL_ENV) {
+        Remove-Item -Path env:VIRTUAL_ENV
+    }
+
+    # Just remove VIRTUAL_ENV_PROMPT altogether.
+    if (Test-Path -Path Env:VIRTUAL_ENV_PROMPT) {
+        Remove-Item -Path env:VIRTUAL_ENV_PROMPT
+    }
+
+    # Just remove the _PYTHON_VENV_PROMPT_PREFIX altogether:
+    if (Get-Variable -Name "_PYTHON_VENV_PROMPT_PREFIX" -ErrorAction SilentlyContinue) {
+        Remove-Variable -Name _PYTHON_VENV_PROMPT_PREFIX -Scope Global -Force
+    }
+
+    # Leave deactivate function in the global namespace if requested:
+    if (-not $NonDestructive) {
+        Remove-Item -Path function:deactivate
+    }
+}
+
+<#
+.Description
+Get-PyVenvConfig parses the values from the pyvenv.cfg file located in the
+given folder, and returns them in a map.
+
+For each line in the pyvenv.cfg file, if that line can be parsed into exactly
+two strings separated by `=` (with any amount of whitespace surrounding the =)
+then it is considered a `key = value` line. The left hand string is the key,
+the right hand is the value.
+
+If the value starts with a `'` or a `"` then the first and last character is
+stripped from the value before being captured.
+
+.Parameter ConfigDir
+Path to the directory that contains the `pyvenv.cfg` file.
+#>
+function Get-PyVenvConfig(
+    [String]
+    $ConfigDir
+) {
+    Write-Verbose "Given ConfigDir=$ConfigDir, obtain values in pyvenv.cfg"
+
+    # Ensure the file exists, and issue a warning if it doesn't (but still allow the function to continue).
+    $pyvenvConfigPath = Join-Path -Resolve -Path $ConfigDir -ChildPath 'pyvenv.cfg' -ErrorAction Continue
+
+    # An empty map will be returned if no config file is found.
+    $pyvenvConfig = @{ }
+
+    if ($pyvenvConfigPath) {
+
+        Write-Verbose "File exists, parse `key = value` lines"
+        $pyvenvConfigContent = Get-Content -Path $pyvenvConfigPath
+
+        $pyvenvConfigContent | ForEach-Object {
+            $keyval = $PSItem -split "\s*=\s*", 2
+            if ($keyval[0] -and $keyval[1]) {
+                $val = $keyval[1]
+
+                # Remove extraneous quotations around a string value.
+                if ("'""".Contains($val.Substring(0, 1))) {
+                    $val = $val.Substring(1, $val.Length - 2)
+                }
+
+                $pyvenvConfig[$keyval[0]] = $val
+                Write-Verbose "Adding Key: '$($keyval[0])'='$val'"
+            }
+        }
+    }
+    return $pyvenvConfig
+}
+
+
+<# Begin Activate script --------------------------------------------------- #>
+
+# Determine the containing directory of this script
+$VenvExecPath = Split-Path -Parent $MyInvocation.MyCommand.Definition
+$VenvExecDir = Get-Item -Path $VenvExecPath
+
+Write-Verbose "Activation script is located in path: '$VenvExecPath'"
+Write-Verbose "VenvExecDir Fullname: '$($VenvExecDir.FullName)"
+Write-Verbose "VenvExecDir Name: '$($VenvExecDir.Name)"
+
+# Set values required in priority: CmdLine, ConfigFile, Default
+# First, get the location of the virtual environment, it might not be
+# VenvExecDir if specified on the command line.
+if ($VenvDir) {
+    Write-Verbose "VenvDir given as parameter, using '$VenvDir' to determine values"
+}
+else {
+    Write-Verbose "VenvDir not given as a parameter, using parent directory name as VenvDir."
+    $VenvDir = $VenvExecDir.Parent.FullName.TrimEnd("\\/")
+    Write-Verbose "VenvDir=$VenvDir"
+}
+
+# Next, read the `pyvenv.cfg` file to determine any required value such
+# as `prompt`.
+$pyvenvCfg = Get-PyVenvConfig -ConfigDir $VenvDir
+
+# Next, set the prompt from the command line, or the config file, or
+# just use the name of the virtual environment folder.
+if ($Prompt) {
+    Write-Verbose "Prompt specified as argument, using '$Prompt'"
+}
+else {
+    Write-Verbose "Prompt not specified as argument to script, checking pyvenv.cfg value"
+    if ($pyvenvCfg -and $pyvenvCfg['prompt']) {
+        Write-Verbose "  Setting based on value in pyvenv.cfg='$($pyvenvCfg['prompt'])'"
+        $Prompt = $pyvenvCfg['prompt'];
+    }
+    else {
+        Write-Verbose "  Setting prompt based on parent's directory's name. (Is the directory name passed to venv module when creating the virtual environment)"
+        Write-Verbose "  Got leaf-name of $VenvDir='$(Split-Path -Path $venvDir -Leaf)'"
+        $Prompt = Split-Path -Path $venvDir -Leaf
+    }
+}
+
+Write-Verbose "Prompt = '$Prompt'"
+Write-Verbose "VenvDir='$VenvDir'"
+
+# Deactivate any currently active virtual environment, but leave the
+# deactivate function in place.
+deactivate -nondestructive
+
+# Now set the environment variable VIRTUAL_ENV, used by many tools to determine
+# that there is an activated venv.
+$env:VIRTUAL_ENV = $VenvDir
+
+if (-not $Env:VIRTUAL_ENV_DISABLE_PROMPT) {
+
+    Write-Verbose "Setting prompt to '$Prompt'"
+
+    # Set the prompt to include the env name
+    # Make sure _OLD_VIRTUAL_PROMPT is global
+    function global:_OLD_VIRTUAL_PROMPT { "" }
+    Copy-Item -Path function:prompt -Destination function:_OLD_VIRTUAL_PROMPT
+    New-Variable -Name _PYTHON_VENV_PROMPT_PREFIX -Description "Python virtual environment prompt prefix" -Scope Global -Option ReadOnly -Visibility Public -Value $Prompt
+
+    function global:prompt {
+        Write-Host -NoNewline -ForegroundColor Green "($_PYTHON_VENV_PROMPT_PREFIX) "
+        _OLD_VIRTUAL_PROMPT
+    }
+    $env:VIRTUAL_ENV_PROMPT = $Prompt
+}
+
+# Clear PYTHONHOME
+if (Test-Path -Path Env:PYTHONHOME) {
+    Copy-Item -Path Env:PYTHONHOME -Destination Env:_OLD_VIRTUAL_PYTHONHOME
+    Remove-Item -Path Env:PYTHONHOME
+}
+
+# Add the venv to the PATH
+Copy-Item -Path Env:PATH -Destination Env:_OLD_VIRTUAL_PATH
+$Env:PATH = "$VenvExecDir$([System.IO.Path]::PathSeparator)$Env:PATH"
diff --git a/server/ven/bin/activate b/server/ven/bin/activate
new file mode 100644
index 00000000..393c1643
--- /dev/null
+++ b/server/ven/bin/activate
@@ -0,0 +1,69 @@
+# This file must be used with "source bin/activate" *from bash*
+# you cannot run it directly
+
+deactivate () {
+    # reset old environment variables
+    if [ -n "${_OLD_VIRTUAL_PATH:-}" ] ; then
+        PATH="${_OLD_VIRTUAL_PATH:-}"
+        export PATH
+        unset _OLD_VIRTUAL_PATH
+    fi
+    if [ -n "${_OLD_VIRTUAL_PYTHONHOME:-}" ] ; then
+        PYTHONHOME="${_OLD_VIRTUAL_PYTHONHOME:-}"
+        export PYTHONHOME
+        unset _OLD_VIRTUAL_PYTHONHOME
+    fi
+
+    # This should detect bash and zsh, which have a hash command that must
+    # be called to get it to forget past commands.  Without forgetting
+    # past commands the $PATH changes we made may not be respected
+    if [ -n "${BASH:-}" -o -n "${ZSH_VERSION:-}" ] ; then
+        hash -r 2> /dev/null
+    fi
+
+    if [ -n "${_OLD_VIRTUAL_PS1:-}" ] ; then
+        PS1="${_OLD_VIRTUAL_PS1:-}"
+        export PS1
+        unset _OLD_VIRTUAL_PS1
+    fi
+
+    unset VIRTUAL_ENV
+    unset VIRTUAL_ENV_PROMPT
+    if [ ! "${1:-}" = "nondestructive" ] ; then
+    # Self destruct!
+        unset -f deactivate
+    fi
+}
+
+# unset irrelevant variables
+deactivate nondestructive
+
+VIRTUAL_ENV="/Users/medhani/Capstone/esp/server/ven"
+export VIRTUAL_ENV
+
+_OLD_VIRTUAL_PATH="$PATH"
+PATH="$VIRTUAL_ENV/bin:$PATH"
+export PATH
+
+# unset PYTHONHOME if set
+# this will fail if PYTHONHOME is set to the empty string (which is bad anyway)
+# could use `if (set -u; : $PYTHONHOME) ;` in bash
+if [ -n "${PYTHONHOME:-}" ] ; then
+    _OLD_VIRTUAL_PYTHONHOME="${PYTHONHOME:-}"
+    unset PYTHONHOME
+fi
+
+if [ -z "${VIRTUAL_ENV_DISABLE_PROMPT:-}" ] ; then
+    _OLD_VIRTUAL_PS1="${PS1:-}"
+    PS1="(ven) ${PS1:-}"
+    export PS1
+    VIRTUAL_ENV_PROMPT="(ven) "
+    export VIRTUAL_ENV_PROMPT
+fi
+
+# This should detect bash and zsh, which have a hash command that must
+# be called to get it to forget past commands.  Without forgetting
+# past commands the $PATH changes we made may not be respected
+if [ -n "${BASH:-}" -o -n "${ZSH_VERSION:-}" ] ; then
+    hash -r 2> /dev/null
+fi
diff --git a/server/ven/bin/activate.csh b/server/ven/bin/activate.csh
new file mode 100644
index 00000000..c5545228
--- /dev/null
+++ b/server/ven/bin/activate.csh
@@ -0,0 +1,26 @@
+# This file must be used with "source bin/activate.csh" *from csh*.
+# You cannot run it directly.
+# Created by Davide Di Blasi <davidedb@gmail.com>.
+# Ported to Python 3.3 venv by Andrew Svetlov <andrew.svetlov@gmail.com>
+
+alias deactivate 'test $?_OLD_VIRTUAL_PATH != 0 && setenv PATH "$_OLD_VIRTUAL_PATH" && unset _OLD_VIRTUAL_PATH; rehash; test $?_OLD_VIRTUAL_PROMPT != 0 && set prompt="$_OLD_VIRTUAL_PROMPT" && unset _OLD_VIRTUAL_PROMPT; unsetenv VIRTUAL_ENV; unsetenv VIRTUAL_ENV_PROMPT; test "\!:*" != "nondestructive" && unalias deactivate'
+
+# Unset irrelevant variables.
+deactivate nondestructive
+
+setenv VIRTUAL_ENV "/Users/medhani/Capstone/esp/server/ven"
+
+set _OLD_VIRTUAL_PATH="$PATH"
+setenv PATH "$VIRTUAL_ENV/bin:$PATH"
+
+
+set _OLD_VIRTUAL_PROMPT="$prompt"
+
+if (! "$?VIRTUAL_ENV_DISABLE_PROMPT") then
+    set prompt = "(ven) $prompt"
+    setenv VIRTUAL_ENV_PROMPT "(ven) "
+endif
+
+alias pydoc python -m pydoc
+
+rehash
diff --git a/server/ven/bin/activate.fish b/server/ven/bin/activate.fish
new file mode 100644
index 00000000..f9347f4a
--- /dev/null
+++ b/server/ven/bin/activate.fish
@@ -0,0 +1,69 @@
+# This file must be used with "source <venv>/bin/activate.fish" *from fish*
+# (https://fishshell.com/); you cannot run it directly.
+
+function deactivate  -d "Exit virtual environment and return to normal shell environment"
+    # reset old environment variables
+    if test -n "$_OLD_VIRTUAL_PATH"
+        set -gx PATH $_OLD_VIRTUAL_PATH
+        set -e _OLD_VIRTUAL_PATH
+    end
+    if test -n "$_OLD_VIRTUAL_PYTHONHOME"
+        set -gx PYTHONHOME $_OLD_VIRTUAL_PYTHONHOME
+        set -e _OLD_VIRTUAL_PYTHONHOME
+    end
+
+    if test -n "$_OLD_FISH_PROMPT_OVERRIDE"
+        set -e _OLD_FISH_PROMPT_OVERRIDE
+        # prevents error when using nested fish instances (Issue #93858)
+        if functions -q _old_fish_prompt
+            functions -e fish_prompt
+            functions -c _old_fish_prompt fish_prompt
+            functions -e _old_fish_prompt
+        end
+    end
+
+    set -e VIRTUAL_ENV
+    set -e VIRTUAL_ENV_PROMPT
+    if test "$argv[1]" != "nondestructive"
+        # Self-destruct!
+        functions -e deactivate
+    end
+end
+
+# Unset irrelevant variables.
+deactivate nondestructive
+
+set -gx VIRTUAL_ENV "/Users/medhani/Capstone/esp/server/ven"
+
+set -gx _OLD_VIRTUAL_PATH $PATH
+set -gx PATH "$VIRTUAL_ENV/bin" $PATH
+
+# Unset PYTHONHOME if set.
+if set -q PYTHONHOME
+    set -gx _OLD_VIRTUAL_PYTHONHOME $PYTHONHOME
+    set -e PYTHONHOME
+end
+
+if test -z "$VIRTUAL_ENV_DISABLE_PROMPT"
+    # fish uses a function instead of an env var to generate the prompt.
+
+    # Save the current fish_prompt function as the function _old_fish_prompt.
+    functions -c fish_prompt _old_fish_prompt
+
+    # With the original prompt function renamed, we can override with our own.
+    function fish_prompt
+        # Save the return status of the last command.
+        set -l old_status $status
+
+        # Output the venv prompt; color taken from the blue of the Python logo.
+        printf "%s%s%s" (set_color 4B8BBE) "(ven) " (set_color normal)
+
+        # Restore the return status of the previous command.
+        echo "exit $old_status" | .
+        # Output the original/"old" prompt.
+        _old_fish_prompt
+    end
+
+    set -gx _OLD_FISH_PROMPT_OVERRIDE "$VIRTUAL_ENV"
+    set -gx VIRTUAL_ENV_PROMPT "(ven) "
+end
diff --git a/server/ven/bin/coverage b/server/ven/bin/coverage
new file mode 100755
index 00000000..6b65ee74
--- /dev/null
+++ b/server/ven/bin/coverage
@@ -0,0 +1,8 @@
+#!/Users/medhani/Capstone/esp/server/ven/bin/python3.11
+# -*- coding: utf-8 -*-
+import re
+import sys
+from coverage.cmdline import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())
diff --git a/server/ven/bin/coverage-3.11 b/server/ven/bin/coverage-3.11
new file mode 100755
index 00000000..6b65ee74
--- /dev/null
+++ b/server/ven/bin/coverage-3.11
@@ -0,0 +1,8 @@
+#!/Users/medhani/Capstone/esp/server/ven/bin/python3.11
+# -*- coding: utf-8 -*-
+import re
+import sys
+from coverage.cmdline import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())
diff --git a/server/ven/bin/coverage3 b/server/ven/bin/coverage3
new file mode 100755
index 00000000..6b65ee74
--- /dev/null
+++ b/server/ven/bin/coverage3
@@ -0,0 +1,8 @@
+#!/Users/medhani/Capstone/esp/server/ven/bin/python3.11
+# -*- coding: utf-8 -*-
+import re
+import sys
+from coverage.cmdline import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())
diff --git a/server/ven/bin/flask b/server/ven/bin/flask
new file mode 100755
index 00000000..d21eb72e
--- /dev/null
+++ b/server/ven/bin/flask
@@ -0,0 +1,8 @@
+#!/Users/medhani/Capstone/esp/server/ven/bin/python3.11
+# -*- coding: utf-8 -*-
+import re
+import sys
+from flask.cli import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())
diff --git a/server/ven/bin/pip b/server/ven/bin/pip
new file mode 100755
index 00000000..9da46430
--- /dev/null
+++ b/server/ven/bin/pip
@@ -0,0 +1,8 @@
+#!/Users/medhani/Capstone/esp/server/ven/bin/python3.11
+# -*- coding: utf-8 -*-
+import re
+import sys
+from pip._internal.cli.main import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())
diff --git a/server/ven/bin/pip3 b/server/ven/bin/pip3
new file mode 100755
index 00000000..9da46430
--- /dev/null
+++ b/server/ven/bin/pip3
@@ -0,0 +1,8 @@
+#!/Users/medhani/Capstone/esp/server/ven/bin/python3.11
+# -*- coding: utf-8 -*-
+import re
+import sys
+from pip._internal.cli.main import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())
diff --git a/server/ven/bin/pip3.11 b/server/ven/bin/pip3.11
new file mode 100755
index 00000000..9da46430
--- /dev/null
+++ b/server/ven/bin/pip3.11
@@ -0,0 +1,8 @@
+#!/Users/medhani/Capstone/esp/server/ven/bin/python3.11
+# -*- coding: utf-8 -*-
+import re
+import sys
+from pip._internal.cli.main import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())
diff --git a/server/ven/bin/py.test b/server/ven/bin/py.test
new file mode 100755
index 00000000..1dbc57b3
--- /dev/null
+++ b/server/ven/bin/py.test
@@ -0,0 +1,8 @@
+#!/Users/medhani/Capstone/esp/server/ven/bin/python3.11
+# -*- coding: utf-8 -*-
+import re
+import sys
+from pytest import console_main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(console_main())
diff --git a/server/ven/bin/pytest b/server/ven/bin/pytest
new file mode 100755
index 00000000..1dbc57b3
--- /dev/null
+++ b/server/ven/bin/pytest
@@ -0,0 +1,8 @@
+#!/Users/medhani/Capstone/esp/server/ven/bin/python3.11
+# -*- coding: utf-8 -*-
+import re
+import sys
+from pytest import console_main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(console_main())
diff --git a/server/ven/bin/python b/server/ven/bin/python
new file mode 120000
index 00000000..6e7f3c7d
--- /dev/null
+++ b/server/ven/bin/python
@@ -0,0 +1 @@
+python3.11
\ No newline at end of file
diff --git a/server/ven/bin/python3 b/server/ven/bin/python3
new file mode 120000
index 00000000..6e7f3c7d
--- /dev/null
+++ b/server/ven/bin/python3
@@ -0,0 +1 @@
+python3.11
\ No newline at end of file
diff --git a/server/ven/bin/python3.11 b/server/ven/bin/python3.11
new file mode 120000
index 00000000..2d175777
--- /dev/null
+++ b/server/ven/bin/python3.11
@@ -0,0 +1 @@
+/Library/Frameworks/Python.framework/Versions/3.11/bin/python3.11
\ No newline at end of file
diff --git a/server/ven/pyvenv.cfg b/server/ven/pyvenv.cfg
new file mode 100644
index 00000000..773389b1
--- /dev/null
+++ b/server/ven/pyvenv.cfg
@@ -0,0 +1,5 @@
+home = /Library/Frameworks/Python.framework/Versions/3.11/bin
+include-system-site-packages = false
+version = 3.11.4
+executable = /Library/Frameworks/Python.framework/Versions/3.11/bin/python3.11
+command = /Library/Frameworks/Python.framework/Versions/3.11/bin/python3 -m venv /Users/medhani/Capstone/esp/server/ven

From 7f5128994af4a6063a820500b17c5b035a9e7ddd Mon Sep 17 00:00:00 2001
From: mkalal6 <137332780+mkalal6@users.noreply.github.com>
Date: Tue, 29 Oct 2024 13:03:27 -0500
Subject: [PATCH 3/7] ensuring selectFile and uploadedFileName are compatible
 with windows as well as mac

---
 client-app/src/components/DraftOrcaDashboard.js | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/client-app/src/components/DraftOrcaDashboard.js b/client-app/src/components/DraftOrcaDashboard.js
index 39d4742e..80128152 100644
--- a/client-app/src/components/DraftOrcaDashboard.js
+++ b/client-app/src/components/DraftOrcaDashboard.js
@@ -24,7 +24,7 @@ const DraftOrcaDashboard = () => {
       return;
     }
     setSelectedFile(selectedFile);
-    setFileName(selectedFile.name.split("/").pop());
+    setFileName(selectedFile.name.split(/[/\\]/).pop());
   };
 
   const isSearchQueryEnabled = () => {
@@ -76,7 +76,7 @@ const DraftOrcaDashboard = () => {
     axios
       .post("http://localhost:5001/upload", formData)
       .then((response) => {
-        const uploadedFileName = response.data.filename.split("/").pop();
+        const uploadedFileName = response.data.filename.split(/[/\\]/).pop();
         setFileName(response.data.filename);
         setUploadedFiles((prevUploadedFiles) => [...prevUploadedFiles, uploadedFileName]);
       })

From c18681658b8dd57134e663c5daed154ec64744df Mon Sep 17 00:00:00 2001
From: mkalal6 <137332780+mkalal6@users.noreply.github.com>
Date: Tue, 29 Oct 2024 13:48:54 -0500
Subject: [PATCH 4/7] deleting ven folder

---
 server/ven/bin/Activate.ps1  | 247 -----------------------------------
 server/ven/bin/activate      |  69 ----------
 server/ven/bin/activate.csh  |  26 ----
 server/ven/bin/activate.fish |  69 ----------
 server/ven/bin/coverage      |   8 --
 server/ven/bin/coverage-3.11 |   8 --
 server/ven/bin/coverage3     |   8 --
 server/ven/bin/flask         |   8 --
 server/ven/bin/pip           |   8 --
 server/ven/bin/pip3          |   8 --
 server/ven/bin/pip3.11       |   8 --
 server/ven/bin/py.test       |   8 --
 server/ven/bin/pytest        |   8 --
 server/ven/bin/python        |   1 -
 server/ven/bin/python3       |   1 -
 server/ven/bin/python3.11    |   1 -
 server/ven/pyvenv.cfg        |   5 -
 17 files changed, 491 deletions(-)
 delete mode 100644 server/ven/bin/Activate.ps1
 delete mode 100644 server/ven/bin/activate
 delete mode 100644 server/ven/bin/activate.csh
 delete mode 100644 server/ven/bin/activate.fish
 delete mode 100755 server/ven/bin/coverage
 delete mode 100755 server/ven/bin/coverage-3.11
 delete mode 100755 server/ven/bin/coverage3
 delete mode 100755 server/ven/bin/flask
 delete mode 100755 server/ven/bin/pip
 delete mode 100755 server/ven/bin/pip3
 delete mode 100755 server/ven/bin/pip3.11
 delete mode 100755 server/ven/bin/py.test
 delete mode 100755 server/ven/bin/pytest
 delete mode 120000 server/ven/bin/python
 delete mode 120000 server/ven/bin/python3
 delete mode 120000 server/ven/bin/python3.11
 delete mode 100644 server/ven/pyvenv.cfg

diff --git a/server/ven/bin/Activate.ps1 b/server/ven/bin/Activate.ps1
deleted file mode 100644
index b49d77ba..00000000
--- a/server/ven/bin/Activate.ps1
+++ /dev/null
@@ -1,247 +0,0 @@
-<#
-.Synopsis
-Activate a Python virtual environment for the current PowerShell session.
-
-.Description
-Pushes the python executable for a virtual environment to the front of the
-$Env:PATH environment variable and sets the prompt to signify that you are
-in a Python virtual environment. Makes use of the command line switches as
-well as the `pyvenv.cfg` file values present in the virtual environment.
-
-.Parameter VenvDir
-Path to the directory that contains the virtual environment to activate. The
-default value for this is the parent of the directory that the Activate.ps1
-script is located within.
-
-.Parameter Prompt
-The prompt prefix to display when this virtual environment is activated. By
-default, this prompt is the name of the virtual environment folder (VenvDir)
-surrounded by parentheses and followed by a single space (ie. '(.venv) ').
-
-.Example
-Activate.ps1
-Activates the Python virtual environment that contains the Activate.ps1 script.
-
-.Example
-Activate.ps1 -Verbose
-Activates the Python virtual environment that contains the Activate.ps1 script,
-and shows extra information about the activation as it executes.
-
-.Example
-Activate.ps1 -VenvDir C:\Users\MyUser\Common\.venv
-Activates the Python virtual environment located in the specified location.
-
-.Example
-Activate.ps1 -Prompt "MyPython"
-Activates the Python virtual environment that contains the Activate.ps1 script,
-and prefixes the current prompt with the specified string (surrounded in
-parentheses) while the virtual environment is active.
-
-.Notes
-On Windows, it may be required to enable this Activate.ps1 script by setting the
-execution policy for the user. You can do this by issuing the following PowerShell
-command:
-
-PS C:\> Set-ExecutionPolicy -ExecutionPolicy RemoteSigned -Scope CurrentUser
-
-For more information on Execution Policies: 
-https://go.microsoft.com/fwlink/?LinkID=135170
-
-#>
-Param(
-    [Parameter(Mandatory = $false)]
-    [String]
-    $VenvDir,
-    [Parameter(Mandatory = $false)]
-    [String]
-    $Prompt
-)
-
-<# Function declarations --------------------------------------------------- #>
-
-<#
-.Synopsis
-Remove all shell session elements added by the Activate script, including the
-addition of the virtual environment's Python executable from the beginning of
-the PATH variable.
-
-.Parameter NonDestructive
-If present, do not remove this function from the global namespace for the
-session.
-
-#>
-function global:deactivate ([switch]$NonDestructive) {
-    # Revert to original values
-
-    # The prior prompt:
-    if (Test-Path -Path Function:_OLD_VIRTUAL_PROMPT) {
-        Copy-Item -Path Function:_OLD_VIRTUAL_PROMPT -Destination Function:prompt
-        Remove-Item -Path Function:_OLD_VIRTUAL_PROMPT
-    }
-
-    # The prior PYTHONHOME:
-    if (Test-Path -Path Env:_OLD_VIRTUAL_PYTHONHOME) {
-        Copy-Item -Path Env:_OLD_VIRTUAL_PYTHONHOME -Destination Env:PYTHONHOME
-        Remove-Item -Path Env:_OLD_VIRTUAL_PYTHONHOME
-    }
-
-    # The prior PATH:
-    if (Test-Path -Path Env:_OLD_VIRTUAL_PATH) {
-        Copy-Item -Path Env:_OLD_VIRTUAL_PATH -Destination Env:PATH
-        Remove-Item -Path Env:_OLD_VIRTUAL_PATH
-    }
-
-    # Just remove the VIRTUAL_ENV altogether:
-    if (Test-Path -Path Env:VIRTUAL_ENV) {
-        Remove-Item -Path env:VIRTUAL_ENV
-    }
-
-    # Just remove VIRTUAL_ENV_PROMPT altogether.
-    if (Test-Path -Path Env:VIRTUAL_ENV_PROMPT) {
-        Remove-Item -Path env:VIRTUAL_ENV_PROMPT
-    }
-
-    # Just remove the _PYTHON_VENV_PROMPT_PREFIX altogether:
-    if (Get-Variable -Name "_PYTHON_VENV_PROMPT_PREFIX" -ErrorAction SilentlyContinue) {
-        Remove-Variable -Name _PYTHON_VENV_PROMPT_PREFIX -Scope Global -Force
-    }
-
-    # Leave deactivate function in the global namespace if requested:
-    if (-not $NonDestructive) {
-        Remove-Item -Path function:deactivate
-    }
-}
-
-<#
-.Description
-Get-PyVenvConfig parses the values from the pyvenv.cfg file located in the
-given folder, and returns them in a map.
-
-For each line in the pyvenv.cfg file, if that line can be parsed into exactly
-two strings separated by `=` (with any amount of whitespace surrounding the =)
-then it is considered a `key = value` line. The left hand string is the key,
-the right hand is the value.
-
-If the value starts with a `'` or a `"` then the first and last character is
-stripped from the value before being captured.
-
-.Parameter ConfigDir
-Path to the directory that contains the `pyvenv.cfg` file.
-#>
-function Get-PyVenvConfig(
-    [String]
-    $ConfigDir
-) {
-    Write-Verbose "Given ConfigDir=$ConfigDir, obtain values in pyvenv.cfg"
-
-    # Ensure the file exists, and issue a warning if it doesn't (but still allow the function to continue).
-    $pyvenvConfigPath = Join-Path -Resolve -Path $ConfigDir -ChildPath 'pyvenv.cfg' -ErrorAction Continue
-
-    # An empty map will be returned if no config file is found.
-    $pyvenvConfig = @{ }
-
-    if ($pyvenvConfigPath) {
-
-        Write-Verbose "File exists, parse `key = value` lines"
-        $pyvenvConfigContent = Get-Content -Path $pyvenvConfigPath
-
-        $pyvenvConfigContent | ForEach-Object {
-            $keyval = $PSItem -split "\s*=\s*", 2
-            if ($keyval[0] -and $keyval[1]) {
-                $val = $keyval[1]
-
-                # Remove extraneous quotations around a string value.
-                if ("'""".Contains($val.Substring(0, 1))) {
-                    $val = $val.Substring(1, $val.Length - 2)
-                }
-
-                $pyvenvConfig[$keyval[0]] = $val
-                Write-Verbose "Adding Key: '$($keyval[0])'='$val'"
-            }
-        }
-    }
-    return $pyvenvConfig
-}
-
-
-<# Begin Activate script --------------------------------------------------- #>
-
-# Determine the containing directory of this script
-$VenvExecPath = Split-Path -Parent $MyInvocation.MyCommand.Definition
-$VenvExecDir = Get-Item -Path $VenvExecPath
-
-Write-Verbose "Activation script is located in path: '$VenvExecPath'"
-Write-Verbose "VenvExecDir Fullname: '$($VenvExecDir.FullName)"
-Write-Verbose "VenvExecDir Name: '$($VenvExecDir.Name)"
-
-# Set values required in priority: CmdLine, ConfigFile, Default
-# First, get the location of the virtual environment, it might not be
-# VenvExecDir if specified on the command line.
-if ($VenvDir) {
-    Write-Verbose "VenvDir given as parameter, using '$VenvDir' to determine values"
-}
-else {
-    Write-Verbose "VenvDir not given as a parameter, using parent directory name as VenvDir."
-    $VenvDir = $VenvExecDir.Parent.FullName.TrimEnd("\\/")
-    Write-Verbose "VenvDir=$VenvDir"
-}
-
-# Next, read the `pyvenv.cfg` file to determine any required value such
-# as `prompt`.
-$pyvenvCfg = Get-PyVenvConfig -ConfigDir $VenvDir
-
-# Next, set the prompt from the command line, or the config file, or
-# just use the name of the virtual environment folder.
-if ($Prompt) {
-    Write-Verbose "Prompt specified as argument, using '$Prompt'"
-}
-else {
-    Write-Verbose "Prompt not specified as argument to script, checking pyvenv.cfg value"
-    if ($pyvenvCfg -and $pyvenvCfg['prompt']) {
-        Write-Verbose "  Setting based on value in pyvenv.cfg='$($pyvenvCfg['prompt'])'"
-        $Prompt = $pyvenvCfg['prompt'];
-    }
-    else {
-        Write-Verbose "  Setting prompt based on parent's directory's name. (Is the directory name passed to venv module when creating the virtual environment)"
-        Write-Verbose "  Got leaf-name of $VenvDir='$(Split-Path -Path $venvDir -Leaf)'"
-        $Prompt = Split-Path -Path $venvDir -Leaf
-    }
-}
-
-Write-Verbose "Prompt = '$Prompt'"
-Write-Verbose "VenvDir='$VenvDir'"
-
-# Deactivate any currently active virtual environment, but leave the
-# deactivate function in place.
-deactivate -nondestructive
-
-# Now set the environment variable VIRTUAL_ENV, used by many tools to determine
-# that there is an activated venv.
-$env:VIRTUAL_ENV = $VenvDir
-
-if (-not $Env:VIRTUAL_ENV_DISABLE_PROMPT) {
-
-    Write-Verbose "Setting prompt to '$Prompt'"
-
-    # Set the prompt to include the env name
-    # Make sure _OLD_VIRTUAL_PROMPT is global
-    function global:_OLD_VIRTUAL_PROMPT { "" }
-    Copy-Item -Path function:prompt -Destination function:_OLD_VIRTUAL_PROMPT
-    New-Variable -Name _PYTHON_VENV_PROMPT_PREFIX -Description "Python virtual environment prompt prefix" -Scope Global -Option ReadOnly -Visibility Public -Value $Prompt
-
-    function global:prompt {
-        Write-Host -NoNewline -ForegroundColor Green "($_PYTHON_VENV_PROMPT_PREFIX) "
-        _OLD_VIRTUAL_PROMPT
-    }
-    $env:VIRTUAL_ENV_PROMPT = $Prompt
-}
-
-# Clear PYTHONHOME
-if (Test-Path -Path Env:PYTHONHOME) {
-    Copy-Item -Path Env:PYTHONHOME -Destination Env:_OLD_VIRTUAL_PYTHONHOME
-    Remove-Item -Path Env:PYTHONHOME
-}
-
-# Add the venv to the PATH
-Copy-Item -Path Env:PATH -Destination Env:_OLD_VIRTUAL_PATH
-$Env:PATH = "$VenvExecDir$([System.IO.Path]::PathSeparator)$Env:PATH"
diff --git a/server/ven/bin/activate b/server/ven/bin/activate
deleted file mode 100644
index 393c1643..00000000
--- a/server/ven/bin/activate
+++ /dev/null
@@ -1,69 +0,0 @@
-# This file must be used with "source bin/activate" *from bash*
-# you cannot run it directly
-
-deactivate () {
-    # reset old environment variables
-    if [ -n "${_OLD_VIRTUAL_PATH:-}" ] ; then
-        PATH="${_OLD_VIRTUAL_PATH:-}"
-        export PATH
-        unset _OLD_VIRTUAL_PATH
-    fi
-    if [ -n "${_OLD_VIRTUAL_PYTHONHOME:-}" ] ; then
-        PYTHONHOME="${_OLD_VIRTUAL_PYTHONHOME:-}"
-        export PYTHONHOME
-        unset _OLD_VIRTUAL_PYTHONHOME
-    fi
-
-    # This should detect bash and zsh, which have a hash command that must
-    # be called to get it to forget past commands.  Without forgetting
-    # past commands the $PATH changes we made may not be respected
-    if [ -n "${BASH:-}" -o -n "${ZSH_VERSION:-}" ] ; then
-        hash -r 2> /dev/null
-    fi
-
-    if [ -n "${_OLD_VIRTUAL_PS1:-}" ] ; then
-        PS1="${_OLD_VIRTUAL_PS1:-}"
-        export PS1
-        unset _OLD_VIRTUAL_PS1
-    fi
-
-    unset VIRTUAL_ENV
-    unset VIRTUAL_ENV_PROMPT
-    if [ ! "${1:-}" = "nondestructive" ] ; then
-    # Self destruct!
-        unset -f deactivate
-    fi
-}
-
-# unset irrelevant variables
-deactivate nondestructive
-
-VIRTUAL_ENV="/Users/medhani/Capstone/esp/server/ven"
-export VIRTUAL_ENV
-
-_OLD_VIRTUAL_PATH="$PATH"
-PATH="$VIRTUAL_ENV/bin:$PATH"
-export PATH
-
-# unset PYTHONHOME if set
-# this will fail if PYTHONHOME is set to the empty string (which is bad anyway)
-# could use `if (set -u; : $PYTHONHOME) ;` in bash
-if [ -n "${PYTHONHOME:-}" ] ; then
-    _OLD_VIRTUAL_PYTHONHOME="${PYTHONHOME:-}"
-    unset PYTHONHOME
-fi
-
-if [ -z "${VIRTUAL_ENV_DISABLE_PROMPT:-}" ] ; then
-    _OLD_VIRTUAL_PS1="${PS1:-}"
-    PS1="(ven) ${PS1:-}"
-    export PS1
-    VIRTUAL_ENV_PROMPT="(ven) "
-    export VIRTUAL_ENV_PROMPT
-fi
-
-# This should detect bash and zsh, which have a hash command that must
-# be called to get it to forget past commands.  Without forgetting
-# past commands the $PATH changes we made may not be respected
-if [ -n "${BASH:-}" -o -n "${ZSH_VERSION:-}" ] ; then
-    hash -r 2> /dev/null
-fi
diff --git a/server/ven/bin/activate.csh b/server/ven/bin/activate.csh
deleted file mode 100644
index c5545228..00000000
--- a/server/ven/bin/activate.csh
+++ /dev/null
@@ -1,26 +0,0 @@
-# This file must be used with "source bin/activate.csh" *from csh*.
-# You cannot run it directly.
-# Created by Davide Di Blasi <davidedb@gmail.com>.
-# Ported to Python 3.3 venv by Andrew Svetlov <andrew.svetlov@gmail.com>
-
-alias deactivate 'test $?_OLD_VIRTUAL_PATH != 0 && setenv PATH "$_OLD_VIRTUAL_PATH" && unset _OLD_VIRTUAL_PATH; rehash; test $?_OLD_VIRTUAL_PROMPT != 0 && set prompt="$_OLD_VIRTUAL_PROMPT" && unset _OLD_VIRTUAL_PROMPT; unsetenv VIRTUAL_ENV; unsetenv VIRTUAL_ENV_PROMPT; test "\!:*" != "nondestructive" && unalias deactivate'
-
-# Unset irrelevant variables.
-deactivate nondestructive
-
-setenv VIRTUAL_ENV "/Users/medhani/Capstone/esp/server/ven"
-
-set _OLD_VIRTUAL_PATH="$PATH"
-setenv PATH "$VIRTUAL_ENV/bin:$PATH"
-
-
-set _OLD_VIRTUAL_PROMPT="$prompt"
-
-if (! "$?VIRTUAL_ENV_DISABLE_PROMPT") then
-    set prompt = "(ven) $prompt"
-    setenv VIRTUAL_ENV_PROMPT "(ven) "
-endif
-
-alias pydoc python -m pydoc
-
-rehash
diff --git a/server/ven/bin/activate.fish b/server/ven/bin/activate.fish
deleted file mode 100644
index f9347f4a..00000000
--- a/server/ven/bin/activate.fish
+++ /dev/null
@@ -1,69 +0,0 @@
-# This file must be used with "source <venv>/bin/activate.fish" *from fish*
-# (https://fishshell.com/); you cannot run it directly.
-
-function deactivate  -d "Exit virtual environment and return to normal shell environment"
-    # reset old environment variables
-    if test -n "$_OLD_VIRTUAL_PATH"
-        set -gx PATH $_OLD_VIRTUAL_PATH
-        set -e _OLD_VIRTUAL_PATH
-    end
-    if test -n "$_OLD_VIRTUAL_PYTHONHOME"
-        set -gx PYTHONHOME $_OLD_VIRTUAL_PYTHONHOME
-        set -e _OLD_VIRTUAL_PYTHONHOME
-    end
-
-    if test -n "$_OLD_FISH_PROMPT_OVERRIDE"
-        set -e _OLD_FISH_PROMPT_OVERRIDE
-        # prevents error when using nested fish instances (Issue #93858)
-        if functions -q _old_fish_prompt
-            functions -e fish_prompt
-            functions -c _old_fish_prompt fish_prompt
-            functions -e _old_fish_prompt
-        end
-    end
-
-    set -e VIRTUAL_ENV
-    set -e VIRTUAL_ENV_PROMPT
-    if test "$argv[1]" != "nondestructive"
-        # Self-destruct!
-        functions -e deactivate
-    end
-end
-
-# Unset irrelevant variables.
-deactivate nondestructive
-
-set -gx VIRTUAL_ENV "/Users/medhani/Capstone/esp/server/ven"
-
-set -gx _OLD_VIRTUAL_PATH $PATH
-set -gx PATH "$VIRTUAL_ENV/bin" $PATH
-
-# Unset PYTHONHOME if set.
-if set -q PYTHONHOME
-    set -gx _OLD_VIRTUAL_PYTHONHOME $PYTHONHOME
-    set -e PYTHONHOME
-end
-
-if test -z "$VIRTUAL_ENV_DISABLE_PROMPT"
-    # fish uses a function instead of an env var to generate the prompt.
-
-    # Save the current fish_prompt function as the function _old_fish_prompt.
-    functions -c fish_prompt _old_fish_prompt
-
-    # With the original prompt function renamed, we can override with our own.
-    function fish_prompt
-        # Save the return status of the last command.
-        set -l old_status $status
-
-        # Output the venv prompt; color taken from the blue of the Python logo.
-        printf "%s%s%s" (set_color 4B8BBE) "(ven) " (set_color normal)
-
-        # Restore the return status of the previous command.
-        echo "exit $old_status" | .
-        # Output the original/"old" prompt.
-        _old_fish_prompt
-    end
-
-    set -gx _OLD_FISH_PROMPT_OVERRIDE "$VIRTUAL_ENV"
-    set -gx VIRTUAL_ENV_PROMPT "(ven) "
-end
diff --git a/server/ven/bin/coverage b/server/ven/bin/coverage
deleted file mode 100755
index 6b65ee74..00000000
--- a/server/ven/bin/coverage
+++ /dev/null
@@ -1,8 +0,0 @@
-#!/Users/medhani/Capstone/esp/server/ven/bin/python3.11
-# -*- coding: utf-8 -*-
-import re
-import sys
-from coverage.cmdline import main
-if __name__ == '__main__':
-    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
-    sys.exit(main())
diff --git a/server/ven/bin/coverage-3.11 b/server/ven/bin/coverage-3.11
deleted file mode 100755
index 6b65ee74..00000000
--- a/server/ven/bin/coverage-3.11
+++ /dev/null
@@ -1,8 +0,0 @@
-#!/Users/medhani/Capstone/esp/server/ven/bin/python3.11
-# -*- coding: utf-8 -*-
-import re
-import sys
-from coverage.cmdline import main
-if __name__ == '__main__':
-    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
-    sys.exit(main())
diff --git a/server/ven/bin/coverage3 b/server/ven/bin/coverage3
deleted file mode 100755
index 6b65ee74..00000000
--- a/server/ven/bin/coverage3
+++ /dev/null
@@ -1,8 +0,0 @@
-#!/Users/medhani/Capstone/esp/server/ven/bin/python3.11
-# -*- coding: utf-8 -*-
-import re
-import sys
-from coverage.cmdline import main
-if __name__ == '__main__':
-    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
-    sys.exit(main())
diff --git a/server/ven/bin/flask b/server/ven/bin/flask
deleted file mode 100755
index d21eb72e..00000000
--- a/server/ven/bin/flask
+++ /dev/null
@@ -1,8 +0,0 @@
-#!/Users/medhani/Capstone/esp/server/ven/bin/python3.11
-# -*- coding: utf-8 -*-
-import re
-import sys
-from flask.cli import main
-if __name__ == '__main__':
-    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
-    sys.exit(main())
diff --git a/server/ven/bin/pip b/server/ven/bin/pip
deleted file mode 100755
index 9da46430..00000000
--- a/server/ven/bin/pip
+++ /dev/null
@@ -1,8 +0,0 @@
-#!/Users/medhani/Capstone/esp/server/ven/bin/python3.11
-# -*- coding: utf-8 -*-
-import re
-import sys
-from pip._internal.cli.main import main
-if __name__ == '__main__':
-    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
-    sys.exit(main())
diff --git a/server/ven/bin/pip3 b/server/ven/bin/pip3
deleted file mode 100755
index 9da46430..00000000
--- a/server/ven/bin/pip3
+++ /dev/null
@@ -1,8 +0,0 @@
-#!/Users/medhani/Capstone/esp/server/ven/bin/python3.11
-# -*- coding: utf-8 -*-
-import re
-import sys
-from pip._internal.cli.main import main
-if __name__ == '__main__':
-    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
-    sys.exit(main())
diff --git a/server/ven/bin/pip3.11 b/server/ven/bin/pip3.11
deleted file mode 100755
index 9da46430..00000000
--- a/server/ven/bin/pip3.11
+++ /dev/null
@@ -1,8 +0,0 @@
-#!/Users/medhani/Capstone/esp/server/ven/bin/python3.11
-# -*- coding: utf-8 -*-
-import re
-import sys
-from pip._internal.cli.main import main
-if __name__ == '__main__':
-    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
-    sys.exit(main())
diff --git a/server/ven/bin/py.test b/server/ven/bin/py.test
deleted file mode 100755
index 1dbc57b3..00000000
--- a/server/ven/bin/py.test
+++ /dev/null
@@ -1,8 +0,0 @@
-#!/Users/medhani/Capstone/esp/server/ven/bin/python3.11
-# -*- coding: utf-8 -*-
-import re
-import sys
-from pytest import console_main
-if __name__ == '__main__':
-    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
-    sys.exit(console_main())
diff --git a/server/ven/bin/pytest b/server/ven/bin/pytest
deleted file mode 100755
index 1dbc57b3..00000000
--- a/server/ven/bin/pytest
+++ /dev/null
@@ -1,8 +0,0 @@
-#!/Users/medhani/Capstone/esp/server/ven/bin/python3.11
-# -*- coding: utf-8 -*-
-import re
-import sys
-from pytest import console_main
-if __name__ == '__main__':
-    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
-    sys.exit(console_main())
diff --git a/server/ven/bin/python b/server/ven/bin/python
deleted file mode 120000
index 6e7f3c7d..00000000
--- a/server/ven/bin/python
+++ /dev/null
@@ -1 +0,0 @@
-python3.11
\ No newline at end of file
diff --git a/server/ven/bin/python3 b/server/ven/bin/python3
deleted file mode 120000
index 6e7f3c7d..00000000
--- a/server/ven/bin/python3
+++ /dev/null
@@ -1 +0,0 @@
-python3.11
\ No newline at end of file
diff --git a/server/ven/bin/python3.11 b/server/ven/bin/python3.11
deleted file mode 120000
index 2d175777..00000000
--- a/server/ven/bin/python3.11
+++ /dev/null
@@ -1 +0,0 @@
-/Library/Frameworks/Python.framework/Versions/3.11/bin/python3.11
\ No newline at end of file
diff --git a/server/ven/pyvenv.cfg b/server/ven/pyvenv.cfg
deleted file mode 100644
index 773389b1..00000000
--- a/server/ven/pyvenv.cfg
+++ /dev/null
@@ -1,5 +0,0 @@
-home = /Library/Frameworks/Python.framework/Versions/3.11/bin
-include-system-site-packages = false
-version = 3.11.4
-executable = /Library/Frameworks/Python.framework/Versions/3.11/bin/python3.11
-command = /Library/Frameworks/Python.framework/Versions/3.11/bin/python3 -m venv /Users/medhani/Capstone/esp/server/ven

From c301d01a97b8238868ca5f3bf40645b87b9ddbaf Mon Sep 17 00:00:00 2001
From: SiriChandanaGarimella
 <156231102+SiriChandanaGarimella@users.noreply.github.com>
Date: Fri, 1 Nov 2024 17:01:17 -0500
Subject: [PATCH 5/7] Updated the upload_file API response

---
 server/usecases/upload_files.py | 6 ++++--
 1 file changed, 4 insertions(+), 2 deletions(-)

diff --git a/server/usecases/upload_files.py b/server/usecases/upload_files.py
index 40861b51..65748d2f 100644
--- a/server/usecases/upload_files.py
+++ b/server/usecases/upload_files.py
@@ -12,8 +12,10 @@ def file_upload_use_case(file):
         return ResponseFailure(ResponseTypes.PARAMETER_ERROR, 'Invalid file type')
 
     try:
-        filename = save_uploaded_file(file)
-        return ResponseSuccess({'message': 'Success', 'filename': filename})
+        file_path = save_uploaded_file(file)
+        file_name = file.filename
+        return ResponseSuccess({'message': 'Success', 'file_name': file_name,
+                                 'file_path': file_path})
     except PermissionError as e:
         return ResponseFailure(ResponseTypes.PARAMETER_ERROR, f'Permission denied: {str(e)}')
     except FileNotFoundError as e:

From 5fb55c1e9f3288cef331af2d5514222d884d90c6 Mon Sep 17 00:00:00 2001
From: mkalal6 <137332780+mkalal6@users.noreply.github.com>
Date: Sun, 3 Nov 2024 21:07:07 -0600
Subject: [PATCH 6/7] completed the changes made in the review comments

---
 client-app/src/components/DraftOrcaDashboard.js | 13 ++++++-------
 1 file changed, 6 insertions(+), 7 deletions(-)

diff --git a/client-app/src/components/DraftOrcaDashboard.js b/client-app/src/components/DraftOrcaDashboard.js
index 80128152..12d308c6 100644
--- a/client-app/src/components/DraftOrcaDashboard.js
+++ b/client-app/src/components/DraftOrcaDashboard.js
@@ -5,7 +5,7 @@ import "../styles/TempComponent.css";
 
 const DraftOrcaDashboard = () => {
   const [selectedFile, setSelectedFile] = useState(null);
-  const [fileName, setFileName] = useState("");
+  const [filePath, setFilePath] = useState("");
   const [searchTerms, setSearchTerms] = useState([]);
   const [specifyLines, setSpecifyLines] = useState([]);
   const [sections, setSections] = useState([]);
@@ -24,7 +24,6 @@ const DraftOrcaDashboard = () => {
       return;
     }
     setSelectedFile(selectedFile);
-    setFileName(selectedFile.name.split(/[/\\]/).pop());
   };
 
   const isSearchQueryEnabled = () => {
@@ -76,8 +75,8 @@ const DraftOrcaDashboard = () => {
     axios
       .post("http://localhost:5001/upload", formData)
       .then((response) => {
-        const uploadedFileName = response.data.filename.split(/[/\\]/).pop();
-        setFileName(response.data.filename);
+        const uploadedFileName = response.data.file_name.split(/[/\\]/).pop();
+        setFilePath(response.data.file_path);
         setUploadedFiles((prevUploadedFiles) => [...prevUploadedFiles, uploadedFileName]);
       })
       .catch((error) => {
@@ -85,9 +84,9 @@ const DraftOrcaDashboard = () => {
       });
   };
 
-  const removeUploadedFile = (fileName) => {
+  const removeUploadedFile = (filePath) => {
     // You can add logic here to delete the file from the server if needed
-    setUploadedFiles((prevUploadedFiles) => prevUploadedFiles.filter((file) => file !== fileName));
+    setUploadedFiles((prevUploadedFiles) => prevUploadedFiles.filter((file) => file !== filePath));
   };
 
   const onSubmit = () => {
@@ -97,7 +96,7 @@ const DraftOrcaDashboard = () => {
     }
 
     const data = {
-      file_path: fileName.toString(),
+      file_path: filePath.toString(),
       search_terms: searchTerms,
       sections: sections,
       specify_lines: specifyLines.join(","),

From 19919187fa0b953ee14f39bfa74c60028a62ba63 Mon Sep 17 00:00:00 2001
From: mkalal6 <137332780+mkalal6@users.noreply.github.com>
Date: Mon, 4 Nov 2024 10:24:27 -0600
Subject: [PATCH 7/7] uploadedFileName changes

---
 client-app/src/components/DraftOrcaDashboard.js | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/client-app/src/components/DraftOrcaDashboard.js b/client-app/src/components/DraftOrcaDashboard.js
index 12d308c6..abd1a3ac 100644
--- a/client-app/src/components/DraftOrcaDashboard.js
+++ b/client-app/src/components/DraftOrcaDashboard.js
@@ -75,7 +75,7 @@ const DraftOrcaDashboard = () => {
     axios
       .post("http://localhost:5001/upload", formData)
       .then((response) => {
-        const uploadedFileName = response.data.file_name.split(/[/\\]/).pop();
+        const uploadedFileName = response.data.file_name;
         setFilePath(response.data.file_path);
         setUploadedFiles((prevUploadedFiles) => [...prevUploadedFiles, uploadedFileName]);
       })