Releases · oborel/obo-relations

Including additional CARO classes in import, in particular the more general 'anatomical structure'
Broadening range for some developmental relations to AS. See https://github.com/obophenotype/uberon/issues/1455

commit 77d7387
Author: cmungall [email protected]
Date: Fri Sep 28 13:54:47 2018 -0700

Further constraining located_in, see comments from Alan: https://github.com/oborel/obo-relations/pull/256#issuecomment-425558558

We keep the weaker D+R constraints in for EL purposes

commit ae9eae1
Author: cmungall [email protected]
Date: Fri Sep 28 13:50:04 2018 -0700

mireot spatial region

commit a8554e8
Author: cmungall [email protected]
Date: Wed Sep 26 11:31:24 2018 -0700

Adding SWRL for phosphorylates, see #259

commit 98157a6
Author: cmungall [email protected]
Date: Wed Sep 26 11:20:55 2018 -0700

domain-range constrs

commit c677fb5
Author: cmungall [email protected]
Date: Tue Sep 25 18:03:12 2018 -0700

domain-range constrs

commit e8c15a3
Author: cmungall [email protected]
Date: Tue Sep 25 17:42:25 2018 -0700

Adding organism from CARO - may change label, see https://github.com/OBOFoundry/Experimental-OBO-Core/issues/6

commit c68f0a1
Author: cmungall [email protected]
Date: Tue Sep 25 17:39:59 2018 -0700

domain/range

commit 5f61d08
Author: cmungall [email protected]
Date: Tue Sep 25 17:20:52 2018 -0700

domain and range constraints

commit ddbe35e
Author: cmungall [email protected]
Date: Tue Sep 25 16:52:26 2018 -0700

Separating out chemical relations into separate module
See also https://github.com/OBOFoundry/Experimental-OBO-Core/issues/7

commit e8ad2e9
Author: cmungall [email protected]
Date: Tue Sep 25 16:52:24 2018 -0700

for-SLME

commit dbf86d2
Author: cmungall [email protected]
Date: Tue Sep 25 16:52:07 2018 -0700

imports

commit 2a86292
Merge: 0619f28 185c458
Author: Chris Mungall [email protected]
Date: Tue Sep 25 16:08:48 2018 -0700

Merge pull request #237 from oborel/issue-235-redux2

Obsoleted "related via dependence to"

commit 0619f28
Merge: 1c82785 a3db7f2
Author: Chris Mungall [email protected]
Date: Tue Sep 25 16:02:45 2018 -0700

Merge pull request #256 from oborel/located-in-domain-range

Adding domain-range constraints for located_in, see #255

commit a3db7f2
Author: cmungall [email protected]
Date: Tue Sep 11 15:39:26 2018 -0700

Adding domain-range constraints for located_in, see #255

note this changes introduces a spurious diff bringing in
AP declarations, this can be ignored

commit 1c82785
Merge: 8d29f03 ef15212
Author: Chris Mungall [email protected]
Date: Thu Aug 30 16:57:53 2018 -0700

Merge pull request #233 from msinclair2/master

Add generically depends on and inverse generic bearer of

commit ef15212
Author: Michael Sinclair [email protected]
Date: Thu Aug 30 17:28:40 2018 -0600

create property chain with gdo and add is carrier of

commit 06a6e4f
Author: Michael Sinclair [email protected]
Date: Fri Jul 20 17:09:25 2018 -0600

removed generic bearer of, include only generically depends on per BFO spec

commit e3f5f5a
Author: Michael Sinclair [email protected]
Date: Mon Jun 25 13:46:02 2018 -0600

Add generically depends on and inverse generic bearer of

commit 8d29f03
Merge: 55a7f51 3f04c7d
Author: Chris Mungall [email protected]
Date: Fri Aug 10 11:15:13 2018 -0700

Merge pull request #248 from oborel/cmungall-patch-2

Update README.md

commit 3f04c7d
Author: Chris Mungall [email protected]
Date: Fri Aug 10 11:09:46 2018 -0700

Update README.md

Make google group canonical

commit 55a7f51
Author: Chris Mungall [email protected]
Date: Tue Jul 31 08:52:39 2018 -0700

Update README.md

commit 33cff44
Merge: a216c15 7252617
Author: Chris Mungall [email protected]
Date: Sun Jul 29 20:37:27 2018 -0700

Merge pull request #245 from oborel/atomic-redux

Making release of atomic (base) file

commit 7252617
Author: cmungall [email protected]
Date: Sun Jul 29 20:28:36 2018 -0700

Renamed component to base

commit f21b93e
Author: cmungall [email protected]
Date: Mon May 21 13:40:55 2018 -0700

First attempt at making atomic module, see https://github.com/INCATools/ontology-starter-kit/issues/50

Conflicts:
	src/ontology/ro-edit.owl

commit a216c15
Merge: ff3fd1f b26fa8a
Author: Chris Mungall [email protected]
Date: Sun Jul 29 20:13:53 2018 -0700

Merge pull request #232 from oborel/mortality_rate

Data property used to record increases in age-specific mortality rate

commit ff3fd1f
Merge: 65a367e 976634c
Author: Chris Mungall [email protected]
Date: Sun Jul 29 20:13:13 2018 -0700

Merge pull request #234 from oborel/cmungall-patch-1

Update ro-idranges.owl

commit 65a367e
Merge: 953ec84 7107c3e
Author: Chris Mungall [email protected]
Date: Thu Jul 26 18:20:16 2018 -0700

Merge pull request #243 from balhoff/issue-242

Remove inverse expression superproperty for ‘enabled by’.

commit 7107c3e
Author: Jim Balhoff [email protected]
Date: Thu Jul 26 10:34:21 2018 -0400

Remove inverse expression super property for ‘enabled by’.

commit 185c458
Author: cmungall [email protected]
Date: Sun Jul 8 13:38:18 2018 -0700

Obsoleted "related via dependence to"
This was used to group causal relations and correlative relations.
The grouping was somewhat arbitrary and very poorly defined.
For now we should not group these two sets of relations
Fixes #235

commit 953ec84
Merge: d9fa8cd 87a13f3
Author: cmungall [email protected]
Date: Sat Jul 7 12:40:27 2018 -0700

Merge branch 'master' of github.com:oborel/obo-relations

commit 976634c
Author: Chris Mungall [email protected]
Date: Mon Jun 25 14:47:45 2018 -0700

Update ro-idranges.owl

Adding id range for @msinclair2

See #233

commit 87a13f3
Author: James A. Overton [email protected]
Date: Wed Jun 6 14:23:18 2018 -0400

Add diagrams for RO Core

- ROCore_Continuants.jpg shows continuant, occurrent, IDC, SDC, GDC, and the relations among them
- ROCore_SDCs.jpg focuses on the subtypes of SDC and their relations to IDC and occurrent
- ROCore.graffle is the source file for these two diagrams

commit b26fa8a
Author: dosumis [email protected]
Date: Tue May 22 18:14:58 2018 +0100

Extended comments and refs.

commit d132eb9
Author: dosumis [email protected]
Date: Tue May 22 18:06:41 2018 +0100

Adding data property used to record increases in age-specific mortality rate

Assets 2

14 Oct 23:07

cmungall

v2018-09-25-PRELEASE

77d7387

2018-10-01 PRERELEASE Pre-release

Pre-release

This is a pre-release

OWL available here:
https://raw.githubusercontent.com/oborel/obo-relations/v2018-09-25-PRELEASE/src/ontology/ro.owl

This release contains stronger domain and range constraints for various relations. It is possible that this will have knock-on effects of rendering classes that use these unsatisfiable. Unfortunately we don't have a readily plumbed-in of checking this en-masse across OBO at the moment.

Please comment on this PR:
#261