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Test data required for testing scimap/spatiallda module #1130

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chiarasch opened this issue Mar 19, 2024 · 0 comments
Open

Test data required for testing scimap/spatiallda module #1130

chiarasch opened this issue Mar 19, 2024 · 0 comments
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@migueLib @chiarasch
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imaging

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@chiarasch
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Requires .csv with X_centroid, Y_centroid, phenotype and sample_id columns.
migueLib added a commit to migueLib/test-datasets that referenced this issue Mar 19, 2024
@migueLib
Add phenotyped file for testing downstream
378f1a6 
This file works to test SpatialLDA this should solve the issue nf-core#1130
@migueLib migueLib mentioned this issue Mar 19, 2024
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imaging
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Hackathon: May 2024
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@migueLib @chiarasch