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Fix prodigal pigz command #698

Merged
merged 4 commits into from
Oct 21, 2024
Merged

Fix prodigal pigz command #698

merged 4 commits into from
Oct 21, 2024

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jfy133
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@jfy133 jfy133 commented Oct 21, 2024

…cific pigz suffxies

PR checklist

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the pipeline conventions in the contribution docs
  • If necessary, also make a PR on the nf-core/mag branch on the nf-core/test-datasets repository.
  • Make sure your code lints (nf-core lint).
  • Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
  • Check for unexpected warnings in debug mode (nextflow run . -profile debug,test,docker --outdir <OUTDIR>).
  • Usage Documentation in docs/usage.md is updated.
  • Output Documentation in docs/output.md is updated.
  • CHANGELOG.md is updated.
  • README.md is updated (including new tool citations and authors/contributors).

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jfy133 commented Oct 21, 2024

@nf-core-bot fix linting

@jfy133 jfy133 merged commit 7d66153 into dev Oct 21, 2024
13 of 15 checks passed
@jfy133 jfy133 deleted the fix-prodigal-pigz branch October 21, 2024 08:31
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@nvnieuwk nvnieuwk nvnieuwk approved these changes

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