From 192e5e986a2194c42cd24d8e1bb83e0cded14a1d Mon Sep 17 00:00:00 2001 From: Thomas Sibley Date: Mon, 1 Jul 2019 10:51:44 -0700 Subject: [PATCH] version 5.1.1 --- CHANGES.md | 29 +++++++++++++++++++++++++++++ augur/__version__.py | 2 +- 2 files changed, 30 insertions(+), 1 deletion(-) diff --git a/CHANGES.md b/CHANGES.md index 1f60a3551..20d503c7a 100644 --- a/CHANGES.md +++ b/CHANGES.md @@ -1,6 +1,35 @@ # __NEXT__ +# 5.1.1 (1 July 2019) + +## Features + +* tree: Add support for the GTR+R10 substitution model. +* tree: Support parentheses in node names when using IQ-TREE. + +## Bug fixes + +* Use the center of the UK for its coordinates instead of London. +* filter: Mark `--output` required, which it always was but wasn't marked. +* filter: Avoid error when no excluded strains file is provided. +* export: Fix for preliminary version 2 schema support. +* refine: Correct error handling when the tree file is missing or empty. + +## Documentation + +* Add examples of Augur usage in the wild. +* Rename and reorganize CLI and Python API pages a little bit to make "where do + I start learning to use Augur?" clearer to non-devs. + +## Development + +* Relax version requirements of pandas and seaborn. The hope is this will make + installation smoother (particularly alongside other packages which require + newer pandas versions) while not encountering breaking changes in newer + versions ourselves. + + # 5.1.0 (29 May 2019) ## Documentation diff --git a/augur/__version__.py b/augur/__version__.py index a5e451313..40f5033b9 100644 --- a/augur/__version__.py +++ b/augur/__version__.py @@ -1 +1 @@ -__version__ = '5.1.0' +__version__ = '5.1.1'