diff --git a/CHANGELOG.md b/CHANGELOG.md index 589a1d483..07866b837 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -2,6 +2,13 @@ All notable changes to Dorado will be documented in this file. +# [0.4.2] (30 Oct 2023) + +This release of Dorado fixes a bug with the CpG-context 5mC/5hmC model calling all contexts and adds beta support for using a barcode alias from a sample sheet. + +* 90a4d013938672af6dac399afbbafbd8bf7814ad - Fix motif for `5mCG_5hmCG` compatible with `dna_r10.4.1_e8.2_400bps_sup@v4.2.0` +* 616b951e3ede257ae6359b6005f60e44a53dd2cf - Beta support for sample sheet aliasing + # [0.4.1] (12 Oct 2023) This release of Dorado fixes a bug with duplex tags and adds functionality to dorado demux. diff --git a/README.md b/README.md index 4864aee5f..eb6dc9289 100644 --- a/README.md +++ b/README.md @@ -18,10 +18,10 @@ If you encounter any problems building or running Dorado, please [report an issu ## Installation - - [dorado-0.4.1-linux-x64](https://cdn.oxfordnanoportal.com/software/analysis/dorado-0.4.1-linux-x64.tar.gz) - - [dorado-0.4.1-linux-arm64](https://cdn.oxfordnanoportal.com/software/analysis/dorado-0.4.1-linux-arm64.tar.gz) - - [dorado-0.4.1-osx-arm64](https://cdn.oxfordnanoportal.com/software/analysis/dorado-0.4.1-osx-arm64.zip) - - [dorado-0.4.1-win64](https://cdn.oxfordnanoportal.com/software/analysis/dorado-0.4.1-win64.zip) + - [dorado-0.4.2-linux-x64](https://cdn.oxfordnanoportal.com/software/analysis/dorado-0.4.2-linux-x64.tar.gz) + - [dorado-0.4.2-linux-arm64](https://cdn.oxfordnanoportal.com/software/analysis/dorado-0.4.2-linux-arm64.tar.gz) + - [dorado-0.4.2-osx-arm64](https://cdn.oxfordnanoportal.com/software/analysis/dorado-0.4.2-osx-arm64.zip) + - [dorado-0.4.2-win64](https://cdn.oxfordnanoportal.com/software/analysis/dorado-0.4.2-win64.zip) ## Platforms @@ -42,7 +42,7 @@ Linux or Windows systems not listed above but which have Nvidia GPUs with ≥8 G If you encounter problems with running on your system, please [report an issue](https://github.com/nanoporetech/dorado/issues). -AWS Benchmarks on NVIDIA GPUs for Dorado 0.3.0 are available [here](https://aws.amazon.com/blogs/hpc/benchmarking-the-oxford-nanopore-technologies-basecallers-on-aws/). Please note: Dorado's basecalling speed is continuously improving, so these benchmarks may not reflect performance with the latest release. +AWS Benchmarks on Nvidia GPUs for Dorado 0.3.0 are available [here](https://aws.amazon.com/blogs/hpc/benchmarking-the-oxford-nanopore-technologies-basecallers-on-aws/). Please note: Dorado's basecalling speed is continuously improving, so these benchmarks may not reflect performance with the latest release. ## Roadmap diff --git a/cmake/DoradoVersion.cmake b/cmake/DoradoVersion.cmake index 607abe903..c261fb60d 100644 --- a/cmake/DoradoVersion.cmake +++ b/cmake/DoradoVersion.cmake @@ -1,6 +1,6 @@ set(DORADO_VERSION_MAJOR 0) set(DORADO_VERSION_MINOR 4) -set(DORADO_VERSION_REV 1) +set(DORADO_VERSION_REV 2) find_package(Git QUIET) if(GIT_FOUND AND EXISTS "${PROJECT_SOURCE_DIR}/.git")