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DESCRIPTION
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Package: kindisperse
Title: Simulate and Estimate Close-Kin Dispersal Kernels
Version: 0.10.3
Authors@R:
person(given = "Moshe-Elijah",
family = "Jasper",
role = c("aut", "cre"),
email = "[email protected]",
comment = c(ORCID = "0000-0003-4541-3223"))
Description: Functions for simulating and estimating kinship-related dispersal. Based
on the methods described in M. Jasper, T.L. Schmidt., N.W. Ahmad, S.P. Sinkins & A.A.
Hoffmann (2019) <doi:10.1111/1755-0998.13043> "A genomic approach to inferring kinship
reveals limited intergenerational dispersal in the yellow fever mosquito".
Assumes an additive variance model of dispersal in two dimensions, compatible with
Wright's neighbourhood area. Simple and composite dispersal simulations are supplied,
as well as the functions needed to estimate parent-offspring dispersal for simulated or
empirical data, and to undertake sampling design for future field studies of dispersal.
For ease of use an integrated Shiny app is also included.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
URL: https://github.com/moshejasper/kindisperse
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Suggests:
testthat,
knitr,
rmarkdown
Imports:
ggplot2,
readr,
shiny,
shinythemes,
ggrepel,
LaplacesDemon,
here,
stats,
methods,
tibble,
grid,
magrittr,
dplyr,
rlang,
tidyselect,
stringr
VignetteBuilder: knitr
Depends:
R (>= 2.10)
Collate:
'DispersalModel.R'
'KinPairData.R'
'dispersal_model.R'
'KinPairSimulation.R'
'app.R'
'app_ports.R'
'axial_helper_functions.R'
'axials_standard.R'
'data.R'
'export_functions.R'
'import_kinpairs.R'
'kindisperse-package.R'
'sample_kindist.R'
'simgraph_data.R'
'simgraph_graph.R'
'simulate_kindist_composite.R'
'simulate_kindist_custom.R'
'simulate_kindist_simple.R'