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evals.py
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evals.py
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#!/usr/bin/env python3
import pickle
import os
import io
from tqdm import tqdm
from skimage.io import imread
from sklearn.preprocessing import normalize
import tensorflow as tf
import numpy as np
import glob2
import numpy as np
from scipy import misc
from sklearn.model_selection import KFold
from scipy import interpolate
import sklearn
from sklearn.decomposition import PCA
class eval_callback(tf.keras.callbacks.Callback):
def __init__(self, basic_model, test_bin_file, batch_size=128, save_model=None, eval_freq=1, flip=True, PCA_acc=False):
super(eval_callback, self).__init__()
bins, issame_list = np.load(test_bin_file, encoding="bytes", allow_pickle=True)
ds = tf.data.Dataset.from_tensor_slices(bins)
_imread = lambda xx: (tf.cast(tf.image.decode_image(xx, channels=3), "float32") - 127.5) * 0.0078125
ds = ds.map(_imread)
self.ds = ds.batch(batch_size)
self.test_issame = np.array(issame_list)
self.test_names = os.path.splitext(os.path.basename(test_bin_file))[0]
self.steps = int(np.ceil(len(bins) / batch_size))
self.basic_model = basic_model
self.max_accuracy, self.cur_acc, self.acc_thresh = 0.0, 0.0, 0.0
self.save_model, self.eval_freq, self.flip, self.PCA_acc = save_model, eval_freq, flip, PCA_acc
if eval_freq > 1:
# If eval_freq > 1, do evaluation on batch, and also on epoch.
self.on_batch_end = lambda batch=0, logs=None: self.__eval_func__(batch, logs, eval_freq=eval_freq)
self.on_epoch_end = lambda epoch=0, logs=None: self.__eval_func__(epoch, logs, eval_freq=1)
self.is_distribute = False
if tf.distribute.has_strategy():
self.is_distribute = True
self.strategy = tf.distribute.get_strategy()
self.num_replicas = self.strategy.num_replicas_in_sync
options = tf.data.Options()
options.experimental_distribute.auto_shard_policy = tf.data.experimental.AutoShardPolicy.DATA
self.ds = self.strategy.experimental_distribute_dataset(self.ds.with_options(options))
def __do_predict__(self):
embs = []
for img_batch in tqdm(self.ds, "Evaluating " + self.test_names, total=self.steps):
emb = self.basic_model(img_batch)
if self.flip:
emb_f = self.basic_model(tf.image.flip_left_right(img_batch))
emb = emb + emb_f
embs.extend(np.array(emb))
return np.array(embs)
def __do_predict_distribute__(self):
embs = []
for img_batch in tqdm(self.ds, "Evaluating " + self.test_names, total=self.steps):
emb = self.strategy.run(self.basic_model, args=(img_batch,)).values
emb = tf.concat(emb, axis=0)
if self.flip:
emb_f = self.strategy.run(lambda xx: self.basic_model(tf.image.flip_left_right(xx)), args=(img_batch,)).values
emb_f = tf.concat(emb_f, axis=0)
emb = emb + emb_f
embs.extend(emb.numpy())
return np.array(embs)
def __eval_func__(self, cur_step=0, logs=None, eval_freq=1):
# print("self.model.params:", self.model.params if self.model else "None")
if cur_step % eval_freq != 0:
return
if eval_freq > 1:
# Evaluting on_batch_end
if cur_step == 0:
return
cur_epoch = (
self.model.history.epoch[-1]
if self.model is not None and len(self.model.history.__dict__.get("epoch", [])) != 0
else 0
)
cur_step = "%d_batch_%d" % (cur_epoch + 1, cur_step)
else:
cur_step = str(cur_step + 1)
dists = []
tf.print("")
if self.is_distribute:
embs = self.__do_predict_distribute__()
else:
embs = self.__do_predict__()
# tf.print("embs.shape: ", embs.shape)
if np.isnan(embs).sum() != 0:
tf.print("NAN in embs, not a good one")
return
embs = normalize(embs)
embs_a = embs[::2]
embs_b = embs[1::2]
dists = (embs_a * embs_b).sum(1)
tt = np.sort(dists[self.test_issame[: dists.shape[0]]])
ff = np.sort(dists[np.logical_not(self.test_issame[: dists.shape[0]])])
self.tt, self.ff, self.embs = tt, ff, embs
t_steps = int(0.1 * ff.shape[0])
acc_count = np.array([(tt > vv).sum() + (ff <= vv).sum() for vv in ff[-t_steps:]])
acc_max_indx = np.argmax(acc_count)
acc_max = acc_count[acc_max_indx] / dists.shape[0]
self.acc_thresh = ff[acc_max_indx - t_steps]
self.cur_acc = acc_max
if self.PCA_acc:
_, _, accuracy, val, val_std, far = evaluate(embs, self.test_issame, nrof_folds=10)
acc2, std2 = np.mean(accuracy), np.std(accuracy)
tf.print(
"\n>>>> %s evaluation max accuracy: %f, thresh: %f, previous max accuracy: %f, PCA accuray = %f ± %f"
% (self.test_names, acc_max, self.acc_thresh, self.max_accuracy, acc2, std2)
)
else:
tf.print(
"\n>>>> %s evaluation max accuracy: %f, thresh: %f, previous max accuracy: %f"
% (self.test_names, acc_max, self.acc_thresh, self.max_accuracy)
)
if acc_max >= self.max_accuracy:
tf.print(">>>> Improved = %f" % (acc_max - self.max_accuracy))
self.max_accuracy = acc_max
if self.save_model:
save_name_base = "%s_basic_%s_epoch_" % (self.save_model, self.test_names)
save_path_base = os.path.join("checkpoints", save_name_base)
for ii in glob2.glob(save_path_base + "*.h5"):
os.remove(ii)
save_path = save_path_base + "%s_%f.h5" % (cur_step, self.max_accuracy)
tf.print("Saving model to: %s" % (save_path))
self.basic_model.save(save_path, include_optimizer=False)
def calculate_roc(thresholds, embeddings1, embeddings2, actual_issame, nrof_folds=10, pca=0):
assert embeddings1.shape[0] == embeddings2.shape[0]
assert embeddings1.shape[1] == embeddings2.shape[1]
nrof_pairs = min(len(actual_issame), embeddings1.shape[0])
nrof_thresholds = len(thresholds)
k_fold = KFold(n_splits=nrof_folds, shuffle=False)
tprs = np.zeros((nrof_folds, nrof_thresholds))
fprs = np.zeros((nrof_folds, nrof_thresholds))
accuracy = np.zeros((nrof_folds))
indices = np.arange(nrof_pairs)
# print('pca', pca)
if pca == 0:
diff = np.subtract(embeddings1, embeddings2)
dist = np.sum(np.square(diff), 1)
for fold_idx, (train_set, test_set) in enumerate(k_fold.split(indices)):
# print('train_set', train_set)
# print('test_set', test_set)
if pca > 0:
print("doing pca on", fold_idx)
embed1_train = embeddings1[train_set]
embed2_train = embeddings2[train_set]
_embed_train = np.concatenate((embed1_train, embed2_train), axis=0)
# print(_embed_train.shape)
pca_model = PCA(n_components=pca)
pca_model.fit(_embed_train)
embed1 = pca_model.transform(embeddings1)
embed2 = pca_model.transform(embeddings2)
embed1 = sklearn.preprocessing.normalize(embed1)
embed2 = sklearn.preprocessing.normalize(embed2)
# print(embed1.shape, embed2.shape)
diff = np.subtract(embed1, embed2)
dist = np.sum(np.square(diff), 1)
# Find the best threshold for the fold
acc_train = np.zeros((nrof_thresholds))
for threshold_idx, threshold in enumerate(thresholds):
_, _, acc_train[threshold_idx] = calculate_accuracy(threshold, dist[train_set], actual_issame[train_set])
best_threshold_index = np.argmax(acc_train)
for threshold_idx, threshold in enumerate(thresholds):
tprs[fold_idx, threshold_idx], fprs[fold_idx, threshold_idx], _ = calculate_accuracy(
threshold, dist[test_set], actual_issame[test_set]
)
_, _, accuracy[fold_idx] = calculate_accuracy(thresholds[best_threshold_index], dist[test_set], actual_issame[test_set])
tpr = np.mean(tprs, 0)
fpr = np.mean(fprs, 0)
return tpr, fpr, accuracy
def calculate_accuracy(threshold, dist, actual_issame):
predict_issame = np.less(dist, threshold)
tp = np.sum(np.logical_and(predict_issame, actual_issame))
fp = np.sum(np.logical_and(predict_issame, np.logical_not(actual_issame)))
tn = np.sum(np.logical_and(np.logical_not(predict_issame), np.logical_not(actual_issame)))
fn = np.sum(np.logical_and(np.logical_not(predict_issame), actual_issame))
tpr = 0 if (tp + fn == 0) else float(tp) / float(tp + fn)
fpr = 0 if (fp + tn == 0) else float(fp) / float(fp + tn)
acc = float(tp + tn) / dist.size
return tpr, fpr, acc
def calculate_val(thresholds, embeddings1, embeddings2, actual_issame, far_target, nrof_folds=10):
assert embeddings1.shape[0] == embeddings2.shape[0]
assert embeddings1.shape[1] == embeddings2.shape[1]
nrof_pairs = min(len(actual_issame), embeddings1.shape[0])
nrof_thresholds = len(thresholds)
k_fold = KFold(n_splits=nrof_folds, shuffle=False)
val = np.zeros(nrof_folds)
far = np.zeros(nrof_folds)
diff = np.subtract(embeddings1, embeddings2)
dist = np.sum(np.square(diff), 1)
indices = np.arange(nrof_pairs)
for fold_idx, (train_set, test_set) in enumerate(k_fold.split(indices)):
# Find the threshold that gives FAR = far_target
far_train = np.zeros(nrof_thresholds)
for threshold_idx, threshold in enumerate(thresholds):
_, far_train[threshold_idx] = calculate_val_far(threshold, dist[train_set], actual_issame[train_set])
if np.max(far_train) >= far_target:
f = interpolate.interp1d(far_train, thresholds, kind="slinear")
threshold = f(far_target)
else:
threshold = 0.0
val[fold_idx], far[fold_idx] = calculate_val_far(threshold, dist[test_set], actual_issame[test_set])
val_mean = np.mean(val)
far_mean = np.mean(far)
val_std = np.std(val)
return val_mean, val_std, far_mean
def calculate_val_far(threshold, dist, actual_issame):
predict_issame = np.less(dist, threshold)
true_accept = np.sum(np.logical_and(predict_issame, actual_issame))
false_accept = np.sum(np.logical_and(predict_issame, np.logical_not(actual_issame)))
n_same = np.sum(actual_issame)
n_diff = np.sum(np.logical_not(actual_issame))
val = float(true_accept) / float(n_same)
far = float(false_accept) / float(n_diff)
return val, far
def evaluate(embeddings, actual_issame, nrof_folds=10, pca=0):
# Calculate evaluation metrics
thresholds = np.arange(0, 4, 0.01)
embeddings1 = embeddings[0::2]
embeddings2 = embeddings[1::2]
tpr, fpr, accuracy = calculate_roc(
thresholds, embeddings1, embeddings2, np.asarray(actual_issame), nrof_folds=nrof_folds, pca=pca
)
thresholds = np.arange(0, 4, 0.001)
val, val_std, far = calculate_val(
thresholds, embeddings1, embeddings2, np.asarray(actual_issame), 1e-3, nrof_folds=nrof_folds
)
return tpr, fpr, accuracy, val, val_std, far
if __name__ == "__main__":
import sys
import argparse
import tensorflow_addons as tfa
# os.environ['TF_CPP_MIN_LOG_LEVEL'] = '2'
# tf.get_logger().setLevel('ERROR')
parser = argparse.ArgumentParser(formatter_class=argparse.ArgumentDefaultsHelpFormatter)
parser.add_argument("-m", "--basic_model", type=str, required=True, help="Model file, keras h5")
parser.add_argument("-b", "--batch_size", type=int, default=128, help="Batch size")
parser.add_argument("-t", "--test_bin_files", nargs="*", type=str, help="Test bin files")
parser.add_argument("-F", "--no_flip", action="store_true", help="Disable flip")
args = parser.parse_known_args(sys.argv[1:])[0]
basic_model = tf.keras.models.load_model(args.basic_model, compile=False)
flip = not args.no_flip
for test_bin_file in args.test_bin_files:
aa = eval_callback(basic_model, test_bin_file, batch_size=args.batch_size, flip=flip)
aa.on_epoch_end()
elif __name__ == "__test__":
from data_distiller import teacher_model_interf_wrapper
mm = teacher_model_interf_wrapper("../models/GhostNet_x1.3_Arcface_Epoch_24.pth")
evals.eval_callback(lambda imm: mm(imm * 128 + 127.5), "/datasets/ms1m-retinaface-t1/agedb_30.bin").on_epoch_end()