12_get_data_subset_tests.yml

target_default: 12_get_data_subset_tests

packages:
  - dataRetrieval
  - yaml
  - EGRET
  - dplyr
  
sources:
  - 10_get_data/code/filter_raw_conc.R
  
include:
  - 10_get_data.yml
  
targets:
  12_get_data_subset_tests:
    depends:
      - tp_first
      - tp_last
      - tp_mean
      - tp_r1
      - tp_r2
      - tp_r3
      - ortho_p_filt_mean
      - ss_mean
      
  # use raw TP conc data, but take first/last value
  tp_first:
    command: subset_raw_conc(tp, stat = I('first'))
    
  tp_last:
    command: subset_raw_conc(tp, stat = I('last'))
    
  # use raw TP conc data, but take mean of values
  tp_mean:
    command: subset_raw_conc(tp, stat = I('mean'))
  
  # use raw TP conc data, but randomly select 1 obs per day
  # do this 3 times to compare results
  tp_r1:
    command: subset_raw_conc(tp, stat = I('random'))
    
  tp_r2:
    command: subset_raw_conc(tp, stat = I('random'))
    
  tp_r3:
    command: subset_raw_conc(tp, stat = I('random'))
  
  # mean values appeared to work, so summarize to mean values
  ortho_p_filt_mean:
    command: subset_raw_conc(ortho_p_filt, stat = I('mean'))
    
  ss_mean:
    command: subset_raw_conc(ss, stat = I('mean'))