Try to understand why .lamindb_current_sources.yaml is sometimes deleted.

[Zethson]

https://laminlabs.slack.com/archives/C07DB677JF6/p1732034802840439

[Zethson]

This is mindboggling and weird.

So I ran

!lamin init --storage ./run-tests --name run-tests --schema bionty

import lamindb as ln
import bionty as bt
import pandas as pd

mondo_diseases = [
    "Alzheimer's disease", "Parkinson's disease", "Breast cancer", "Colorectal cancer", "Asthma", 
    "Diabetes mellitus type 2", "Hypertension", "Multiple sclerosis", "Osteoporosis", "Cystic fibrosis", 
    "Huntington's disease", "Leukemia", "Lung cancer", "Prostate cancer", "Rheumatoid arthritis", 
    "Sickle cell anemia", "Thalassemia", "Schizophrenia", "Bipolar disorder", "Liver cirrhosis",
    "Chronic obstructive pulmonary disease", "Pancreatic cancer", "Psoriasis", "Amyotrophic lateral sclerosis", "Epilepsy"
]

fake_diseases = [f"FakeDisease_{i}" for i in range(1, 26)]

df = pd.DataFrame({
    "Disease": mondo_diseases + fake_diseases,
})

curator = ln.Curator.from_df(df, categoricals={"Disease": bt.Disease.name})
curator.validate()

then I ran the same cell again without restarting the kernel and then it just got deleted. If I now keep running it, the issue persists. However, if I restart the kernel and then execute it, it's fine. So it must have something to do with that.